Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01159 ATGCCTTCGTCATACCCTCGCTCTCCACCTCGCACACCCTCCTTCCTTATCCTCTCATGCCTCTTCCTCTCTCTCATCGCTTTCTTCGCTTTTCTCAGACCCCTCCCACACCCTCTCTGCCCCAACCGCACCCCCACATCGGTTCGAGTCCTCTGGGAccaccgcccctccgcccaccgcaaccctcacgcccTTAACAGACACAAAGTTATGGCCTTTGTTGGTATTCAAACCGGCTTCGGGTCCCTCGCTAGGCGCCAATCTCTCAGGAACACTTGGTTTCCTTCCGATCCGCATGCACTCCAAGGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTGATCGGGAGAACGAGTCATAGATCAAAGATGTCCGCACTTCAGAAGGAAGTGGCACAATATGATGATTTCATTCAACTGGATATCGAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTGGCTTTCTTCAAAGCTGCTTATGCACTTTTTGAAGCTGACTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGACCGTCTTTCATTACTGCTGGCAAAAGAGAGATCTCACCCTCAGACTTACTTAGGATGCATGAAAAAGGGCCCTGTTTTCACTGATCCCAAACTCAAATGGTATGAGCCACTTTCTAATTTGCTTGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATATACGCTCTTTCTGCTGATGTTGTATCGAGCTTAGTAGCACTTAAGAATAACAGTTTCCGGATGTTCAGCAATGAGGATGTTACAATTGGAGCTTGGATGCTTGCAATGAATGTCAACTATGAGAATAACCATGAACTTTGTGCTAAACAGTGTACGTCCACATCAATTGCTGTGTGGGATATTCCAAAATGTTCAGGTCTCTGTAATCCAGAAAAGAGAATGTTGGAACTCCATCAAATGGAAAGTTGTACTCAGAGTCCAACTGTGGAATCTGATGAATAG 987 0.4316 MPSSYPRSPPRTPSFLILSCLFLSLIAFFAFLRPLPHPLCPNRTPTSVRVLWDHRPSAHRNPHALNRHKVMAFVGIQTGFGSLARRQSLRNTWFPSDPHALQGLEEATGLAFRFVIGRTSHRSKMSALQKEVAQYDDFIQLDIEEEYSKLPYKTLAFFKAAYALFEADFYVKADDDIYLRPDRLSLLLAKERSHPQTYLGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVVSSLVALKNNSFRMFSNEDVTIGAWMLAMNVNYENNHELCAKQCTSTSIAVWDIPKCSGLCNPEKRMLELHQMESCTQSPTVESDE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01159 328 Pfam Galactosyltransferase 84 278 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca10g01159 328 Gene3D - 59 321 - -
Cca10g01159 328 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca10g01159 328 PANTHER HEXOSYLTRANSFERASE 7 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01159 Cca-Chr10 14887371 14891801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01159 11 328 Glycosyltransferase AT1G53290 68.902 1.33e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01159 - - gmx:100806694 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01159 10 14887371 14891801 Cca10g01159 10 14887371 14891801 ECH