Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01157 ATGGCATTGCGTCACTTACGATTCTtccctcacacgcttcctctcactctcactcccaaacccaacaataaccgcttcactccctcacactctctctctTCCTCAATCATGGCCAACGCTCACAAGGTCCTCGTTCCGATCGCCGACGGCACCGAGCCTATGGAGGCCGTCATCACCATCGACGTCATCCGTCGTGCTGGCGCCGACGTCACCGTCGCTTCCGCCTCCTCCAACCTCGCCGTCCAAGCCCTCCACGGCGTCAAGATCCTcgccgatgcctccgtctccgacgtcgccgccaccgccTTTGACCTCGTCGCTCTCCCTGGAGGGTTACAGGGTGTTGAGAATCTGAGAGACAGTAAAGTTCTGGAAGGGTTGGTGAAGAAGCATGTCGAGGATGGACGGCTTTATGCTGCGGTGTGTGCTGCTCCTGCGGCAGTGCTTGGGCCTTGGGGTCTGCTCAATGGGTTGAAGGCGACTTGTTATCCTTCATTGATGGAGAAATTGGCCTCTTACGCAGCCTCTACTGTTGAGTCTAGGGTGCAGGTGGATGGCAGAGTTGTGACCAGTCGTGGCCCGGGAACTACCATGGAGTTTGCTGTTGCATTGATTGAGCAGTTGATTGGAAAAGAGAAAGCGGATGAAGTTGCAGGTCCACTGGTCATGCGTTCCAATCATGATGATGAACATACTTTTAAGGAGCTTAACCCAGTGCAGTGGACAGTTGACAATCCACCCAAGATTCTTGTACCAATTGCTAATGGTTCAGAGGAAATGGAAGCTGTGATTATCATTGATATTCTGCGAAGAGCAAAGGCAAAGGTTGTGGTTGCTTCTGTTGAGGATAAACTAGAGATTGTGGCTTCACGCAAAGTTAAACTAGAGGCAGACATGCTCCTTGATGAAGCAGCCAAACTTTCATATGACCTTATTGTGTTGCCTGGCGGACTTGGTGGTGCCCAAGCTTTTGCCAACTCAGAAACCTTGGTGAGTTTGCTGAAAAAGCAAAGAGAATCAAACAAATATTATGGAGCAATTTGTGCATCCCCGGCTTTAGTCTTGGAGCCCCATGGCTTGCTGAAGGGTAAAAAGGCCACTGCCTTTCCTGCAATGTGCAGCAAGTTATCAGATCAGAGCGAAGTAGAAAACAGGGTGATAGTTGATGGTAACCTTGTTACCAGCAGAGGCCCTGGAACCACCTTCGAGTTTGCATTTGCTATTGTGGAAAAGCTGTTTGGACGCGAATTAGCATTAGAACTTGCGAAGACAATGGTGTTCGCACGTTCGTAG 1293 0.4548 MALRHLRFFPHTLPLTLTPKPNNNRFTPSHSLSSSIMANAHKVLVPIADGTEPMEAVITIDVIRRAGADVTVASASSNLAVQALHGVKILADASVSDVAATAFDLVALPGGLQGVENLRDSKVLEGLVKKHVEDGRLYAAVCAAPAAVLGPWGLLNGLKATCYPSLMEKLASYAASTVESRVQVDGRVVTSRGPGTTMEFAVALIEQLIGKEKADEVAGPLVMRSNHDDEHTFKELNPVQWTVDNPPKILVPIANGSEEMEAVIIIDILRRAKAKVVVASVEDKLEIVASRKVKLEADMLLDEAAKLSYDLIVLPGGLGGAQAFANSETLVSLLKKQRESNKYYGAICASPALVLEPHGLLKGKKATAFPAMCSKLSDQSEVENRVIVDGNLVTSRGPGTTFEFAFAIVEKLFGRELALELAKTMVFARS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01157 430 PANTHER BNAA06G01020D PROTEIN 39 425 - -
Cca10g01157 430 SUPERFAMILY Class I glutamine amidotransferase-like 246 428 IPR029062 -
Cca10g01157 430 TIGRFAM not_thiJ: DJ-1 family protein 248 423 IPR006287 -
Cca10g01157 430 TIGRFAM not_thiJ: DJ-1 family protein 42 219 IPR006287 -
Cca10g01157 430 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 39 425 - -
Cca10g01157 430 Pfam DJ-1/PfpI family 248 410 IPR002818 -
Cca10g01157 430 Pfam DJ-1/PfpI family 41 207 IPR002818 -
Cca10g01157 430 Gene3D - 35 235 IPR029062 -
Cca10g01157 430 Gene3D - 242 430 IPR029062 -
Cca10g01157 430 CDD GATase1_DJ-1 43 208 - -
Cca10g01157 430 SUPERFAMILY Class I glutamine amidotransferase-like 41 228 IPR029062 -
Cca10g01157 430 CDD GATase1_DJ-1 249 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01157 Cca-Chr10 14852239 14856479 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01157 K03152 - gmx:100803116 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01157 10 14852239 14856479 Cca10g01157 10 14852239 14856479 ECH