Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01144 ATGGACGTCGACGATGCGTCCGACGCAGAACCCGCCGCCACCACCAGCGCCGGTTCCGCGGCCAAGAAATCGAGGCAGCGGAAGAGGAAGGAGCACACGGCGGACAAGGAGGGCCACGCGGCGGCGCGAGAGAAGCTGGCGAAGAGAATCCTCTTGTCCCTGACGAGGCCTTCCTACGTTCTAGGGTTGGGTCCCAAGCCTCTGCGGCTGGAACACCGCACGAGGCTGCGCTACCTGCTGCGGAGGCTCGTCAACCAGCACCACTGGGTCGCCGCCAGCGGCGTTCTCAGTGCCTACTTGAAGGGGACGCTCACTGACGCCTCTCCCTTCAGGAACCGTCTCAAGTTTTGGGCTTTATTCGAGCTTCTTAGGCACGTGGACAAGTCTTCTATGAATCCAACGAGAATGAAGAATCTCTATGATATTTGGTCCAAGAAAATTGGATCAATGAAGACTTGGCCAGTGGAGAGCAGATATGCAGTCCATTTGGAGTTCATGTTTTTCTGTCTTTTGCAAGGCAATGCTGGGGATGCATACCAGCTTGCTCTATGccttGAGCAAGAAAAAGTTGATGTTGATCCAGTGTCAAAGATGATGATGGGTTTGACATTCTATGAGCTATGGTATTCTTCTATCTCCAAAGAATTCCAGTGGAGAAATTCAGATCAGTTTGACTTGCAAGAGAACTCACATATGGAGGGAACCTCATTCAACAATGAAACTGGACAGTTAGAGTGGTTTAATTCAGTTGAATCCCACATGGCTGAATCCCAATATCAACATGATTCGGATGCCTCTGTCATGAATGATAAGCAGATATCTAGAAATGTTGTCTTCAATGAAGAAATGAAGCAGGAAGGTTTTTACTTAAGTTCTGAAGAGCAAAGATCTGGAGATCCTTTTTCTAACAGTAGAGATCTTCCACATGATACCTTGCTTGCCCTTTGTGGACTTGATTTGTGGCTGTTGCCCTTGCATTTTTCTGATGAGAACAGTTTTGAGGAGTTCATGTTTTTGCAAAGAAGCCAACCTAATGACTATTACAAAAATGCAGTGAAATATTTACAACTAGCTCTCAATTCAGAACCTTCTGCTTCAGCTGCATTACTTCCATTGGTACAGTTGTTGCTGATTGGAGGTCAAGTTGATGAGGCTCTAAATATGCTTGAGAAGCAACGCTGTAAGTCAGCCTCTGTACTCCCAATTAGGGTAAGGGCTGCTCTCTTGGAGCGTTTAGATCGAAACAACTCTCCCTTGCTTCTTAGCTGTTTTGAAGATATATTGAAGAAGGATCCAACATGTAGTGATGCCTTAACGAAACTTGTCAAGATGCACCAAAATGGAGACTATTGTCTTGAATCTCTGTTGGAAATGATTGCTTTACATTTAGATGCTACAGATGCAGAATACAATACGTGGAAGGTATTCTGTTCATGTTTCTGTAAACTCTCTAACTACGAAGAAGACTGTATGTCTTCATGCCCCATTCAAAATGAAGATGAACGCCTGCAGCATTGTTCCTTTACCAAAACCCCTAAAATATTTACGGATGGTGTGTTGGGAAAATCTTGGAGGCTTCGCTGCAGGTGGTGGCTAACAAGACATTTCAACGATCACAAGCTCCAATCAGAAATAGAAGCTGGTGATTTGCAGTTAGTTACATACAAAGCAGCATGTGCATCGTATATGTATGGACGAGAGTTCAACTATGTTGCGAAGGCTTATTCTCATTTAGAGAAAGAAAATGATAAGGAGTTATTGTTGTTCTTGGATGAGCACATGGGAAGTTCATTTGGAATTTATAAAAATTTCAAAAGAAATTTACTCATATAA 1833 0.4403 MDVDDASDAEPAATTSAGSAAKKSRQRKRKEHTADKEGHAAAREKLAKRILLSLTRPSYVLGLGPKPLRLEHRTRLRYLLRRLVNQHHWVAASGVLSAYLKGTLTDASPFRNRLKFWALFELLRHVDKSSMNPTRMKNLYDIWSKKIGSMKTWPVESRYAVHLEFMFFCLLQGNAGDAYQLALCLEQEKVDVDPVSKMMMGLTFYELWYSSISKEFQWRNSDQFDLQENSHMEGTSFNNETGQLEWFNSVESHMAESQYQHDSDASVMNDKQISRNVVFNEEMKQEGFYLSSEEQRSGDPFSNSRDLPHDTLLALCGLDLWLLPLHFSDENSFEEFMFLQRSQPNDYYKNAVKYLQLALNSEPSASAALLPLVQLLLIGGQVDEALNMLEKQRCKSASVLPIRVRAALLERLDRNNSPLLLSCFEDILKKDPTCSDALTKLVKMHQNGDYCLESLLEMIALHLDATDAEYNTWKVFCSCFCKLSNYEEDCMSSCPIQNEDERLQHCSFTKTPKIFTDGVLGKSWRLRCRWWLTRHFNDHKLQSEIEAGDLQLVTYKAACASYMYGREFNYVAKAYSHLEKENDKELLLFLDEHMGSSFGIYKNFKRNLLI 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01144 610 MobiDBLite consensus disorder prediction 1 41 - -
Cca10g01144 610 PANTHER TAF RNA POLYMERASE I SUBUNIT A 6 606 - -
Cca10g01144 610 SUPERFAMILY TPR-like 347 449 IPR011990 GO:0005515
Cca10g01144 610 Pfam TAF RNA Polymerase I subunit A 83 576 IPR039495 GO:0000120|GO:0006360
Cca10g01144 610 Gene3D Tetratricopeptide repeat domain 326 494 IPR011990 GO:0005515
Cca10g01144 610 PANTHER TAF RNA POLYMERASE I SUBUNIT A 6 606 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01144 - - gmx:100819662 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01144 10 14603677 14611147 Cca10g01144 10 14603677 14611147 ECH