Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01141 ATGAGGATTCCGAccattcgccgcttcacaactccctctctcacttcccaccatcccaaatcctacgtcTCCGACTGCAGAGCCGTCCTCGTCCCCCACTTCGGCGGCCCGCACGTGCTCCAGCTTCACTCCCACGTGCCACTCCCCCCTCTCAGGCCGCACGAAGTCCTCGTTCGCGCCCGCGCCGTCGCCATCAATCCCTTGGACACTCGTATGCGCGCCGGTTATGGCCGTTGCCTTTTCGAGCGGCTGCTGCCTCTCATTTTGGGGCGCGACGTCAGCGGCGAGGTTGCGGCGGTTGGAGCTGCCGTCAAGTCGTTGAGTGTGGGAGAGCAGGTCTTTGGAGCTCTGCATCCGACTGCGGTGAGAGGCACTTACACGGACTATGCGATTCTCTCGGAAGAGGAGGTTATTTCGAAACCGGATTCGCTTGATCATGTGGAAGCCAGTGCCATACCTTTTGCTGCATTGACAGCTTGGCGTGCTCTAAAAAGTACAGCTAGAATAAGTGAGGGACAAAGGATATTAGTAGTGGGAGGTGGAGGAGCAGTAGGATTTGCTGCAATTCAGCTTGCTGTTGCTGCTGGTTGCTCTGTTGTAACTACTTGTGGAAGTCAAAGCGTAAGCAGATTGTTAGCAGTTGGTGCAGAGCAGGCTGTTGATTATGTGGCTGAGGATGTTGAATTGGCTATAAAGGGGACGTTTGATGCTGTTTTGGACACAATTGGCGTTCCAGAGACAGAACGGATGGGCATTAATTTTCTGAAACGAGGTGGACACTACATGACTCTTCAGGTAGTATACGAAAGTTTATCACCTTTTCATCTTTATCATACTTGA 840 0.4929 MRIPTIRRFTTPSLTSHHPKSYVSDCRAVLVPHFGGPHVLQLHSHVPLPPLRPHEVLVRARAVAINPLDTRMRAGYGRCLFERLLPLILGRDVSGEVAAVGAAVKSLSVGEQVFGALHPTAVRGTYTDYAILSEEEVISKPDSLDHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGFAAIQLAVAAGCSVVTTCGSQSVSRLLAVGAEQAVDYVAEDVELAIKGTFDAVLDTIGVPETERMGINFLKRGGHYMTLQVVYESLSPFHLYHT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01141 279 Gene3D - 155 265 - -
Cca10g01141 279 SMART PKS_ER_names_mod 35 278 IPR020843 GO:0016491
Cca10g01141 279 SUPERFAMILY GroES-like 24 176 IPR011032 -
Cca10g01141 279 CDD MDR_like_2 27 264 - -
Cca10g01141 279 Pfam Zinc-binding dehydrogenase 183 271 IPR013149 -
Cca10g01141 279 Pfam Alcohol dehydrogenase GroES-like domain 53 115 IPR013154 -
Cca10g01141 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 267 IPR036291 -
Cca10g01141 279 PANTHER PROTEIN AST1-RELATED 14 264 - -
Cca10g01141 279 PANTHER PROTEIN AST1-RELATED 14 264 - -
Cca10g01141 279 Gene3D - 33 154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01141 K23164 - gmx:100799923 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01141 10 14559031 14562613 Cca10g01141 10 14559031 14562613 ECH