Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01139 ATGTTGCAGTCTCAGTTTCTGTTGCCACTATCACCCTCACTCACACAGACACTCCATAAACCCCCTCTCTCCCTTCTTCCACCACTTCACCACAAACCCACCATTCTCCACTCTGTTTCGGTCTCAGCAATTCCTCCATTTCTCGCACAGCTCGCCAATGAAGCAGACGTAGAAGGCCCCGTCGAACTCCCCTTCTCTTCTTCCATTTTCGCCACCACCGACGACCCTTCTCCCATTCAAGTCGCTTCCAGCGTtctcctcaccggcgccatctccgtcttcctcttccgctccctcCGCCGCAGGGCTCAACGCGTCAAACAATCCCAATTCAGGTCTTCAGGAGAGAAGAAGACGATTAAGGAAGAAGCATTGGATAGCTTGAAAGCTTTGGGGTCAGCTTCAGTAGAGGCTAAGGGTCCACCTTCACCCGGTCAGGCATTGCTTGGGGGAGTATCTGCGGGAATTATTGCACTTATTCTCTATAAGTTTGCCACTACCATCGAGGCATCTCTAAACCGACAAACAATTTCAGATAACTACTCTGTCCGCCAGATAACCATCACCATAAGGACAATAGTGAATGGCTTGACCTACCTTGCAACATTTGTTTTTGGCCTGAATTCCCTTGGTTTATTCCTTTATTCTCTCCAGCTTGGCATCAAATCCATTATGGAAGGTTCAACTGAAAGTAAAAGCACTGATCAGTCAAATTCATCTATTGAGAGTCCCACGGATAACTCTGAATTGAGCAGCAGGAAGGAAGAACAAAGTTCCAATGATGCACAATAA 792 0.4444 MLQSQFLLPLSPSLTQTLHKPPLSLLPPLHHKPTILHSVSVSAIPPFLAQLANEADVEGPVELPFSSSIFATTDDPSPIQVASSVLLTGAISVFLFRSLRRRAQRVKQSQFRSSGEKKTIKEEALDSLKALGSASVEAKGPPSPGQALLGGVSAGIIALILYKFATTIEASLNRQTISDNYSVRQITITIRTIVNGLTYLATFVFGLNSLGLFLYSLQLGIKSIMEGSTESKSTDQSNSSIESPTDNSELSSRKEEQSSNDAQ 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01139 263 PANTHER OS02G0307800 PROTEIN 47 259 - -
Cca10g01139 263 MobiDBLite consensus disorder prediction 248 263 - -
Cca10g01139 263 Pfam Protein of unknown function (DUF3082) 142 219 IPR021434 -
Cca10g01139 263 MobiDBLite consensus disorder prediction 228 247 - -
Cca10g01139 263 MobiDBLite consensus disorder prediction 228 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01139 Cca-Chr10 14538654 14543586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01139 - - gmx:100799393 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01139 10 14538654 14543586 Cca10g01139 10 14538654 14543586 ECH