Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01129 ATGGGAAGAATCTTCACGGTGGAGCTCGAGGGCAGGTCTTATAGATGCAAGTTCTGCAGAACTCACTTGGCCCTTGCAGATGATCTCATCTCCAGGGCGTTTCATTGCCGCAGGGGAAAAGCATACCTATTCAATAATGCTGTGAACTTCACAATTGGAGCATCAGAAGAAAGGATGATGCTTTCAGGATTACATACTGTGGCAGATATTTTTTGCTGTTGCTGTGGTCAAATAATTGGTTGGAAATATGAATCTGCACACGAGAAGAGTCAAAAGTATAAAGAAGGGAAGTTTGTTCTTGAAAGAGGAAGGATTGTTGATGAAGTTGATTTCTCAGCTGAATTCTATATCGATAGTCGTGCCTGCATGAGTGATACTGAAGATGCTTAA 390 0.4179 MGRIFTVELEGRSYRCKFCRTHLALADDLISRAFHCRRGKAYLFNNAVNFTIGASEERMMLSGLHTVADIFCCCCGQIIGWKYESAHEKSQKYKEGKFVLERGRIVDEVDFSAEFYIDSRACMSDTEDA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01129 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 105 IPR004910 -
Cca10g01129 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Cca10g01129 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
Cca10g01129 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01129 Cca-Chr10 14379325 14385277 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01129 - - gmx:100813120 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01129 10 14379325 14385277 Cca10g01129 10 14379325 14385277 ECH