Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01109 ATGGAAATCAGTTCAAGGCTTCAAGAGAGAGAGAACCACAACCACAGCCACAGTCACAGCCACCCTTCTCCTATGAACTCTCCAACAAGCAATGTGagcaactgcatgagcagcagcaacagcaacaATGGCATCCAAATCCCTACACCACCCCTCACTCCCAAAACCATCCCCAGATCTGACTCAAACCCTTACCCTACAACTTTTGTCCAAGCTGACACCTCCACTTTCAAGCAAGTAGTCCAAATGCTAACAGGCTCATCAGACACCACAAAACAACAAGATCCACCACCACCATCTAGAAACTTCAACATACCCCCCATCAAGACCCCACCAAAGAAGCAACAAGGCTTCAAGCTCTATGAGAGGAGGAACAGCCTCAAGAACAGCCTCATGCTCAACACCCTCATGCCCAATTTTGCTCACAACAACAACAACTCTCCATCATCCTTCTCACCAAGAAAGCCTGAGATCCTCTCCCCAAGCCTTCTTGATTTCCCTTCCCTTGCTCTTAGTCCTGTCACCCCTTTGAATGATGACCCTTTTGACAAATCCTCACCTTCATTGGGAAACTCGTCAGAGGAGGATAAGGCCATAGCTGAAAAGGGCTTCTACTTGCATCCTTCCCCCATGACCACTCCTAGAGACTCAGAGCCCCAGCTCTTGCCTTTGTTCCCAGTTACCTCACCTAGAGTCTCACAATCACCTTCTTAA 714 0.4622 MEISSRLQERENHNHSHSHSHPSPMNSPTSNVSNCMSSSNSNNGIQIPTPPLTPKTIPRSDSNPYPTTFVQADTSTFKQVVQMLTGSSDTTKQQDPPPPSRNFNIPPIKTPPKKQQGFKLYERRNSLKNSLMLNTLMPNFAHNNNNSPSSFSPRKPEILSPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSSEEDKAIAEKGFYLHPSPMTTPRDSEPQLLPLFPVTSPRVSQSPS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01109 237 MobiDBLite consensus disorder prediction 169 237 - -
Cca10g01109 237 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 1 237 IPR039611 -
Cca10g01109 237 MobiDBLite consensus disorder prediction 179 193 - -
Cca10g01109 237 MobiDBLite consensus disorder prediction 139 158 - -
Cca10g01109 237 PANTHER VQ MOTIF PROTEIN 1 237 - -
Cca10g01109 237 MobiDBLite consensus disorder prediction 1 69 - -
Cca10g01109 237 MobiDBLite consensus disorder prediction 83 118 - -
Cca10g01109 237 MobiDBLite consensus disorder prediction 19 50 - -
Cca10g01109 237 MobiDBLite consensus disorder prediction 139 156 - -
Cca10g01109 237 MobiDBLite consensus disorder prediction 83 98 - -
Cca10g01109 237 Pfam VQ motif 64 90 IPR008889 -
Cca10g01109 237 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01109 Cca-Chr10 14049160 14050742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01109 - - gmx:100818804 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01109 10 14049160 14050742 Cca10g01109 10 14049160 14050742 ECH