Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01105 ATGGCGGTTGAGGTTGTGGGATTTGAGATGGTTCAAGGACCTGTGGAGAATGGTGTTGAAGGACCAAAACCTGTTTTGCACGAGAAGGAGAATGGCAAGGTGGAAAAAGATCTGGGGGCTGCTGAGGCCATAAAATTTGGGACACATGGAGATGAATCTGTCAAAGGGGAAGAGAATAATGTTTCAGATGCCAATGTCCCGAAAGATGCTGTTGAAGAGTGGCCTGCACCTAAGCAGATTCATTCTTTTTATTTTGTCAGGTGGCGGCCCTATGATGATCCAACAATCAAATCTAAAGCTGATCAGCTTGACAAAGAGATCAGCAAGAAAAATCAATCCCGGTTTCAGATCACTGAAGCACTGAAGGCAAAGCGGTCAGAACGAGCTGAGTTGATTTCTCAGATTAAGGCTCTTAGAGGTGACAGTAGGCAATTTCAAAGTATTGTGGATGAGAAAATAAAAGAGATTGAACCTCTGCAGCAAGCACTGGGCAAGCTGCGCACCCCAAATAATGCGGGTCAGGGTGGTTTGTGCTCATCTGAGGAGGAACTCAATAGAGTTATATATAGTTTGCAATACCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAAATCCTCCGTGAAATCAAACAGCTTGAAGGGACAAGGGAGAAGGTTATTGCTAATGCTGCAATGAGGGCTAAGTTACAGGAATCTATGGGGCAGAAGGAAGCCATTCAAGATCAGGTTAAGCTTATTGGTGGTGATTTGGATGGAGTGAAGAAAGAGAGACAAGCAATTCGGTCCAAAATCAAGCAGATTGATGATGTACTCAAAACCATTGACAAGGATATCCAGACTCTACAGGATGAACTGGCTTCTGTTTCTCAGAAGAGGGACAAATCATTTGAGAGCATGCAGCAGCTCAGAAAACAGCGTGAGGAGGGGAACACCTATTTCTACCAAAGCCGTACAATTCTGAACAAAGCACGGGAGCTGGCTGCAAAGAAAGATATTAACACTCTTGATGAACTTGCACAGACAGAGGTTGAGAAATTTATGGCACACTGGAATGGTGAGAAAACTTTTAGGAATGATTATGAAAAAAGAATTTTGCAATCATTGGACATGCGGCAGTTGAGCCGGGATGGACGGATGAGGAACCCGGATGAAAAACCATTGCTAGAAGAACCAAAGCCTGCTGAGCCTGAGATATTACCAAAAACTGTCCCAAAACAGCCAAAGGAGGATCCTAAGCCTTCTCCACAAGAAGCTTTGCCTGCTCAGAAAGAATCCGAAAGCAAGGCGAGAGCTTTGAAATCCAAACCGGATAACAAGGCCAAGGACTTAGCTGAAACTGATGAATATGAATTCGAAAATCCCCAAAAGGAGGCCCCTGCTAAAGATCCTGAAATTGATCCAGCAAAGCTGAAAGAGATGAAAAGAGAGGAGGAAATTGCGAAAGCAAAGCTGGCCTTGGAAAGAAAGAAGAAGTTAGCAGAGAAAGCTGCAGCCAAAGCTGCCCTCAGAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGACCGAGAGAAGAAAGCAAAGAAGAAGTCTTCGGGCGCTGCAGCTGTTGCCAACCCTGAGGATGAACCGAATGAGGAAGTTGTAGAGGCTACAGAACCTGAAAAGGTTGACGAAGACGTTCAAGCCCCAGCTCCGGTGAAGGTAAAGGTCCAGAAGGAGAGTGGCATCAGGTCCAGGGGCCGAGCAAGAGGCGGCCCGGATTCAGTTCCAAAAGTTATTCTTAAGAGGAAGAAGTCTAACAATTACTGGATGTGGCTTGCAGCTTCTGCTGCTTTGTTGGTCCTCCTGTTGGTGGTGCTTGGATACATCTATCTTTTCTGA 1869 0.4532 MAVEVVGFEMVQGPVENGVEGPKPVLHEKENGKVEKDLGAAEAIKFGTHGDESVKGEENNVSDANVPKDAVEEWPAPKQIHSFYFVRWRPYDDPTIKSKADQLDKEISKKNQSRFQITEALKAKRSERAELISQIKALRGDSRQFQSIVDEKIKEIEPLQQALGKLRTPNNAGQGGLCSSEEELNRVIYSLQYRIQHESIPLTEEKQILREIKQLEGTREKVIANAAMRAKLQESMGQKEAIQDQVKLIGGDLDGVKKERQAIRSKIKQIDDVLKTIDKDIQTLQDELASVSQKRDKSFESMQQLRKQREEGNTYFYQSRTILNKARELAAKKDINTLDELAQTEVEKFMAHWNGEKTFRNDYEKRILQSLDMRQLSRDGRMRNPDEKPLLEEPKPAEPEILPKTVPKQPKEDPKPSPQEALPAQKESESKARALKSKPDNKAKDLAETDEYEFENPQKEAPAKDPEIDPAKLKEMKREEEIAKAKLALERKKKLAEKAAAKAALRAQKEAEKKLKDREKKAKKKSSGAAAVANPEDEPNEEVVEATEPEKVDEDVQAPAPVKVKVQKESGIRSRGRARGGPDSVPKVILKRKKSNNYWMWLAASAALLVLLLVVLGYIYLF 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01105 622 Coils Coil 267 294 - -
Cca10g01105 622 MobiDBLite consensus disorder prediction 374 476 - -
Cca10g01105 622 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 1 621 - -
Cca10g01105 622 PANTHER PROTON PUMP-INTERACTOR 1-LIKE 1 621 - -
Cca10g01105 622 MobiDBLite consensus disorder prediction 426 476 - -
Cca10g01105 622 MobiDBLite consensus disorder prediction 493 526 - -
Cca10g01105 622 MobiDBLite consensus disorder prediction 493 583 - -
Cca10g01105 622 Coils Coil 473 525 - -
Cca10g01105 622 MobiDBLite consensus disorder prediction 374 415 - -
Cca10g01105 622 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01105 Cca-Chr10 13999134 14003016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01105 - - gmx:100819875 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01105 10 13999134 14003016 Cca10g01105 10 13999134 14003016 ECH