Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01103 ATGGGGTTCATAAACATAGAGAAGAAATGGATATATCCTTTCATCGTGTGTTCTGCTGTGGGCATGCTCTTTCTAGTAACATCCTTCAACATGGGTCTTGTCTCCTCAATTCACTCCATCAATTCCCTATTTTTCTTTCTCCCATCTCATTTGCGCACAAACCAATCTGCCTCCGTTTTCGTTGAGAAGAAGGCTTCTCCTGCGCCGGCGCCGGCTAAGGCTAAGCCTTCAATTCCTCGCTTTGCTTACTTGATTTCCGGCTCCAAAGGTGACTTGGAAAAGCTTTGGAGGACCCTTCATGCACTTTACCATCCTTTAAACCATTATGTTGTTCATATGGACCTGGAGGCGCCGCTTGAGGAAAGGATGGAGATTGCACATAGAATTGAGAGACAACATGTCTTTGCCGAGGTTGGAAATGTTTATGTAATCACAAAGGCTAACATGGTCACTTACCGAGGGCCAACGATGGTTGCTAATACTCTTCATGCTTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAACCTTAGTGCTTCAGACTATCCTCTTGTGACTCAGGATGATCTGATATATACCTTTGCAGATTTAGATAGAAACCTTAACTTCATTGAGCACACAAGTCGGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCTTTAATTGTAGACCCCGGGCTTTATTTGTCAACCAAATCTGATGTATATTGGGTCAATCCTAAGAGAGCTCTGCCAACAGCATTTAAACTATTCACTGGTTCTGCATGGATGGTTTTATCACATGACTTTGTTGAATATATTGTTTGGGGATGGGATAATCTGCCAAGGACCCTTCTCATGTACTACACAAATTTTCTGTCTTCCCCTGAAGGCTACTTTCAAACTGTTGCATGCAATGTGCCAGAGTTAGCCAAAACCCTTGTCAACACTGACTTGCATTATATTGCATGGGACAACCCTCCTAAGCAGCACCCTCATGTCCTTAACATCAATGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAGTTTCAACAAGATGATGCAGCCTTGGATTTTCTTGATAAAAAAATCCTCAGAAGGAGAAATGGACTATTCCCGTTAGGTGGTTGGTGCACTGGCAAACCAAAATGTTCCGAGATTGGAAACATTTATAAACTCAAACCTGGTCCAGGAGCTCAAAGGCTTCATCGCCTCGTTGCCAGCTTAACGTTGAAGGCTAAATCTGGTGAGGATCAGTGTACATAG 1269 0.431 MGFINIEKKWIYPFIVCSAVGMLFLVTSFNMGLVSSIHSINSLFFFLPSHLRTNQSASVFVEKKASPAPAPAKAKPSIPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHMDLEAPLEERMEIAHRIERQHVFAEVGNVYVITKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIYTFADLDRNLNFIEHTSRLGWKFDKRAMPLIVDPGLYLSTKSDVYWVNPKRALPTAFKLFTGSAWMVLSHDFVEYIVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNVPELAKTLVNTDLHYIAWDNPPKQHPHVLNINDTDKMVESGAAFARKFQQDDAALDFLDKKILRRRNGLFPLGGWCTGKPKCSEIGNIYKLKPGPGAQRLHRLVASLTLKAKSGEDQCT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01103 422 Pfam Core-2/I-Branching enzyme 81 340 IPR003406 GO:0016020|GO:0016757
Cca10g01103 422 PANTHER OS01G0201100 PROTEIN 4 421 - -
Cca10g01103 422 PANTHER GLYCOSYLTRANSFERASE 4 421 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01103 Cca-Chr10 13964353 13967931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01103 1 421 Glycosyltransferase AT3G15350 65.485 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01103 - - gmx:100776045 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01103 10 13964353 13967931 Cca10g01103 10 13964353 13967931 ECH