Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01099 ATGACTGGAGTGTCATTGGGTGTGCGCACAGGGAGCTATGGGTCGCTGCAGCTGCAAAACGGCAACGTTTCGCCCTTGCTCGTGCGTAGACCTTCAAAGGCGCTCCTCTTCAACCCCAGAGAGAAAGAGAGGGGTTTCCCTTTTATTTGCAGGCTCCTTGGGCGAGGGAAGGTCGCAATGCTCCTCATGCTTGGCCTCGCCCTTTGTCTTTTCATTTTTGGTTGCTTTACTGTTTACAGAGTAGGTGGAAACATCACTAGTGAAATTGAAGATACACGATCTAATGCTATTACTAGGTATGGAATTTTAAGACCTCGTGGAGTAGTAGAAGATAAGTCACGGGGTAGTAATTCTTCTAGAATGACCTCATTGACAAATAGACGTAGAAATACAGCTAGGCTTCCTCCTGCTCCTCATTCATTGTCCTTGTCCAAGTCTAGAGGCAACAAGGGATATTTTCCTATTTGGGGACATCGATGTGACCATTTTGCATTTCCTCCTCCACCACCAGCTGATAGAAGACGGCCTGGACCACGGCCATGCCCTGTGTGTTATATTCCAGTGGAGGATGCTATAGCTAGTATGCCAAGTTCCCCATCAGAATCTCCCATTCTTCGCACTTTGACATATGTACATGATGAAAATCCAACTAGAAGTGATCTGCTCGGTGGTTCTGATTTTGGTGGATACCCTTCTCTGGATGAAAGGGATGCTGCTTTTGATATAAAAGAGACCATGAGAGTGCATTGTGGATTTGTCAGAGGAAGCAGACCTGGTCGCCAGACAGGATTTGATTTTGATGAGGCAGATCTTTTAGAGTTGGATCAGTACCATGATGTCATTGTTGCATCTGCCATATTTGGAAACTATGATGTTATACAGCAGCCCAGGAACATCAGTTCAAAAGCAAGGAAAAACATTCCGTTCTATATGTTCATTGATGAAGAAACAGAAATGTATATGAAGAATGTCAGTATTTTGAGTAGCAGCAGGAGAGTTGGATTATGGAGAATCATTGTTGTTCATAACATCCCTTATGCTGATTCTCGGCGTAATGGAAAGATTCCAAAGCTTCTATTGCACAGGATCTTCCCCAATGTCCGATATTCGATATGGATTGATGGGAAGCTTGAGCTCGTTATGGACCCATACCAAATTCTTGAAAGGTTCTTGTGGCGTCCGAATGCTACTTTTGCAATTTCAAGACACTACAGACGCTTTGATGTATTTGTTGAGGCTGAGGCTAATAAAGCTGCTGGGAAATATGAAAACGCTTCTATTGATCACCAAATTCAATTTTATCAATACCACGATGGTTTAACTCATTATTCCAGGGAAAAGCTTCCTATAACTAGTGATGTTCCTGAAGGTTGTGTTATCATAAGAGAACACATTCCAATTACAAATCTCTTTACTTGCTTATGGTTCAATGAAGTTGATCGCTTTACTTCCAGAGATCAGTTAAGCTTTTCCACAGTTAGAGACAAAATCATGGCAAAAGTTAATTGGAGTATTAACATGTTTATGGATTGCGAAAGACGAAACTTTGTGATACAGGCTTATCATAGAGACATATTGGAGCACATGCCTCCTCCAGTTGTTGTAACCCGGCGTCCTGGCCCACCTGCTTCTCATACCAATAGGCCTCAGATAAAGAATCATCCAAGGCGTGGGAGAGACAAGAGATTAGGTTCAAAGCGTCATCATAGATTAATAGGCAATGTTGTTATGAACCACATTTTGATTTAG 1749 0.4242 MTGVSLGVRTGSYGSLQLQNGNVSPLLVRRPSKALLFNPREKERGFPFICRLLGRGKVAMLLMLGLALCLFIFGCFTVYRVGGNITSEIEDTRSNAITRYGILRPRGVVEDKSRGSNSSRMTSLTNRRRNTARLPPAPHSLSLSKSRGNKGYFPIWGHRCDHFAFPPPPPADRRRPGPRPCPVCYIPVEDAIASMPSSPSESPILRTLTYVHDENPTRSDLLGGSDFGGYPSLDERDAAFDIKETMRVHCGFVRGSRPGRQTGFDFDEADLLELDQYHDVIVASAIFGNYDVIQQPRNISSKARKNIPFYMFIDEETEMYMKNVSILSSSRRVGLWRIIVVHNIPYADSRRNGKIPKLLLHRIFPNVRYSIWIDGKLELVMDPYQILERFLWRPNATFAISRHYRRFDVFVEAEANKAAGKYENASIDHQIQFYQYHDGLTHYSREKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMAKVNWSINMFMDCERRNFVIQAYHRDILEHMPPPVVVTRRPGPPASHTNRPQIKNHPRRGRDKRLGSKRHHRLIGNVVMNHILI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01099 582 MobiDBLite consensus disorder prediction 550 568 - -
Cca10g01099 582 MobiDBLite consensus disorder prediction 114 130 - -
Cca10g01099 582 MobiDBLite consensus disorder prediction 535 568 - -
Cca10g01099 582 Pfam Protein of unknown function (DUF616) 208 522 IPR006852 -
Cca10g01099 582 PANTHER DUF616 FAMILY PROTEIN 3 575 - -
Cca10g01099 582 PANTHER ALKALINE CERAMIDASE-RELATED 3 575 IPR006852 -
Cca10g01099 582 MobiDBLite consensus disorder prediction 109 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01099 Cca-Chr10 13899095 13906405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01099 - - gmx:100810918 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01099 10 13899095 13906405 Cca10g01099 10 13899095 13906405 ECH