Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01095 ATGATCATGGCAACAAAttttcttctctccatcctcttttctcttttcactttCTTCTCCTTCAACCCTCTGTCCTCCTATGCCTCACAACCTTCTTACAAAGACCACTGTGCTTCCATAGTTGAAGActcaacccccacctccaaactcagcctcaaccCTTTCCCTCTTGGTGATCATCACAATGGTTACTACATAGGAGGTGACAGCATCATCGATGTTGGTGCTTCTTGGAACCGCTTCTCCTTTTACCTCTCAAAAAGGGAGACACGTGCCACTCAAACCCCAAAACTTTTCAAAGTTGTTGCCACTATATCATTTAGAAGCACCAACACATTCAGTGATGGTTATGGTTCTTATTATGGGGCTCATCGTAGAGGTTACGTGACCTTTAAGCTTGATGGGTTTTGGCATGAGTCTTCAGGGAAGGTTTGCATGGTTGGGATTGGTGGTGGTTTTTCCAAAGCAGGTAACCCTCTCAATGTGAATGCTGTTTTTAAGCTTAATAATGTGTTCAATGCAAGTAACATCACTAGCTTGGTTAGTGGAAGCTTGGAGAGTTTGAGTCCTAAAAAGGATGAGAACTACTTTGAACGCATTTCTGTGTTGATGTTTCCAAAAGGAAGTTACAATTATTCCTTGGATACCATAGAAGTTGCTAGGGAGTTCTCTCAAGGGAGTGATGATAGGGAGGGATTAGCATTGAACTTAAATTCATTTAGTTTTTGTAAGTCTCCCCTCTCTTGGGGGATTGGAAGACTCCAATTAGAGTACTCTCTTGATTGCCATTCATCTAAGAAATGTTCTATAAGTGGGAGTTCTGGTCAAGGTCAACTTCCATCCCTAATGTCTTTGACAGGCTTTGAATGTTCTCTTACTGCTAAGAAACATAGGTTGAGGGTTCTAATGGAGTTTCCAGATATTCGTTATCATTTGATTAACCAAAGTTTTGATGCCAAAACTATGTTAGTAGGGGAAGGATGGTGGGATGAGAAGAACAACATGTTGAGTGTAGTTGCTTGCCATATCATGGGAATGTCAGCATCATCCTTGGATGGCACTCATGTGGGTGATTGCTCAGTAAGATTGAAATTGAGATTCCCCTTAATTTGGTCAATAAAGAACACTAGTAGCATAGTGGGCCAAATTTGGAGCAACAAGAGTGCAAGTGATCCATCATATTTCAAGATGGTAACATTTAGAAATGATGAGGATCGTGGGGTGGCAGGTCAAGGCTTAAAGTATGAGTATAGCCAACTAGAGAAGGTTAACAAAACATGTCCAACACACAAGCCTAATGACAAGGGGAAAAGATATCCAGAGGCCGATTCTCGCAACATGGGATTTGGTGTGTCAGTTAGAGAGTCTAACAAAAGAGTAGCATGGGGATATTCAGAACCCTTAGCTGTTGATGATGAATTCTCTGAGTCTAGCCTATATAAAACTTCTGATTCTTTCTCAGTTTTCTCAAATGAAGTTCCTGATGGAATCCTCAACATCAACAATGGTAGCTTGTTTAACATAAGCTACAAGATTAGCCTCTCAGTGATGTCTTCATCAAAGTTAGGTGACAGGGATTCTGTGTTTAATTTGTCCTCTCAGAGAGTGAAGATCTCAGCAGAAGGAGTTTATGATGCTGGATTAGGAACCTTGTGTATGGTAGGTTGCCGTGACATTCTCTCTAACACAAACACCGAGATACCAGTAGCTCATTCTGTGGACTGTGAGATTCTATTGAATTTTCAGTTTCCATCATTGGACTTGAATGATGGAAGCTACATTAAGGGAAGTATTGAAAGCACGCGTAAAGAACATGATCCTCTTTACTTCAAGCGTTTAGACCTATCCGGGGTTGCATATTATAGAGAAGCAGCAAGAAGAAATGTTTACAGAATGGATATGGAAGTCATCATGGCTCTAATCTCCACAACTCTAGCATGTGCTTGTATAGGATTGCAACTCTACAAGGTGAAGAGAGAACCAAATGTGCTACCCTTCATGTCACTTATTATGATGTCAATTCTCACGTTGAGTTACATGGTGCCCCTTGTTCTCAACTTTGAAGCTCTTCTCACTCAAAATCCCAACAACAAAAACTGGCTATTCAGAAATAATGGATGGCTTGAAGTTAATGAAACAAGTGTGAGGCTGATCACCATGGTGGCTTTCTTGTTGCAATTTCGGCTCTTGTATTTGACTTGGTCAGCAAGAAAGAGTGATGAAAGCAAAAAAGGCCTATGGATTGCTGAGAGGAACACAACTTATGTTACTTTACCCTTGTATGCATCAGGGTTATTGATTGCTTTGTTGGTGAAGTTGAACAAGGGTCCATACCAGCCTTCATATTGGGAGAACATGAAATCTTATGCTGGTTTGGTTTTGGATGGTTTTCTCTTACCACAAATCATTCTAAACCTTTTTTCAAATATGAGAGACAATGTTCTTTCATGTTCTTTCTACTTTGGAACTACTTTTGTGAGACTGTTGCCCCATGCCTATGATCTTTACAGGGCTCATAGTGATGCTCCCCAAGATAATGGTTCATACTACTATGCAGATCCAAGTGAAGATTTTTACTCCACTGCTTGGGATATTGCCATTCCACTGGGAGGTATCCTATTTGCTATCATTATCTACTTGCAGCAACGTTTTGGTGCACATTGTATTTTGCCTCATAGGTTCAAAGGGTCTAAGGTATATGAAAAGTTGCCTGTGGTTACTGAATCTGAAGCAGAAAAGGAAACAACCAACATGTAA 2757 0.3943 MIMATNFLLSILFSLFTFFSFNPLSSYASQPSYKDHCASIVEDSTPTSKLSLNPFPLGDHHNGYYIGGDSIIDVGASWNRFSFYLSKRETRATQTPKLFKVVATISFRSTNTFSDGYGSYYGAHRRGYVTFKLDGFWHESSGKVCMVGIGGGFSKAGNPLNVNAVFKLNNVFNASNITSLVSGSLESLSPKKDENYFERISVLMFPKGSYNYSLDTIEVAREFSQGSDDREGLALNLNSFSFCKSPLSWGIGRLQLEYSLDCHSSKKCSISGSSGQGQLPSLMSLTGFECSLTAKKHRLRVLMEFPDIRYHLINQSFDAKTMLVGEGWWDEKNNMLSVVACHIMGMSASSLDGTHVGDCSVRLKLRFPLIWSIKNTSSIVGQIWSNKSASDPSYFKMVTFRNDEDRGVAGQGLKYEYSQLEKVNKTCPTHKPNDKGKRYPEADSRNMGFGVSVRESNKRVAWGYSEPLAVDDEFSESSLYKTSDSFSVFSNEVPDGILNINNGSLFNISYKISLSVMSSSKLGDRDSVFNLSSQRVKISAEGVYDAGLGTLCMVGCRDILSNTNTEIPVAHSVDCEILLNFQFPSLDLNDGSYIKGSIESTRKEHDPLYFKRLDLSGVAYYREAARRNVYRMDMEVIMALISTTLACACIGLQLYKVKREPNVLPFMSLIMMSILTLSYMVPLVLNFEALLTQNPNNKNWLFRNNGWLEVNETSVRLITMVAFLLQFRLLYLTWSARKSDESKKGLWIAERNTTYVTLPLYASGLLIALLVKLNKGPYQPSYWENMKSYAGLVLDGFLLPQIILNLFSNMRDNVLSCSFYFGTTFVRLLPHAYDLYRAHSDAPQDNGSYYYADPSEDFYSTAWDIAIPLGGILFAIIIYLQQRFGAHCILPHRFKGSKVYEKLPVVTESEAEKETTNM 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01095 918 PANTHER DUF2921 FAMILY PROTEIN 3 914 - -
Cca10g01095 918 Pfam Protein of unknown function (DUF2921) 34 890 IPR021319 -
Cca10g01095 918 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 3 914 IPR021319 -
Cca10g01095 918 Coils Coil 912 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01095 Cca-Chr10 13857609 13860543 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01095 - - ccaj:109805727 1814.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01095 10 13857609 13860543 Cca10g01095 10 13857609 13860543 ECH