Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01094 ATGAAttctcttcactccattctcttctttcttctcactatctcttctttctaccttgtctcctcttttacttCAACACCCTCTTACAAAGACCATTGTGGTTCAATAGTTCCAGAGTCAACTCCCAATGGACTCATCCACAACTCTTCCCCTTTTGATGATTACTACAGAGGTTACTTCACAGGAGGTGATAGCATCATAGATGGTGGAACTTCCTTTAACCAATACTCCTTTGCCTTCGAACCAATGCACACACGTGCAACCAAGTCCTCTGACTTGTTCAAAGTTGAAGGCTCTGCATCACTCACCTCCAGCATATCTTACTACCATGTAGGGAACGTCAGCTATGGTGAGAGGTTGAGATATGAGCGCCAACGCCGCTACCGTAGAAGCCATGTAAACTTCAAGCTTGATGGCTTCTGGTCTGAGTCTTCAGGGAAGGTTTGCATGGTAGGGACAGGAAATGGTTATTCCAAGGAAGGTAAGTATCTTAATCTGGATGTTGTGTTTAAGCTTGATAATGTGTTCAATGCAAGCAATATCACTAGCTTGGTGAGTGGAACATTGGAGAGCTTGAGGAAGGATTGGAGCCACTTTGAACCCATTTCTGTGGTGATCTTTCCAAAAGCAAATTACAAATATACCTTGGATTCCATAAAAGTAGCCAATGAGTTCTCTTCTGGGAGTGATGATACTACAAAGGGTGGTTTACCATTGAATTCAATGAGTTTTTGTTCACATTCCCTCTCAAGGGCTATTAGGAATCTCCAATTGGAGTTCTCTCCTGAGTGCAATTCTTTTAAGAATTGCACTCCTATTAGTGAGAGTTCTGGTCAATTGCCATCTGTAGTGTCTTTGAAAGGCATCGAGTGTTCTATCACTAACAACAAGCATAGGTTGAGGGTTCTGATGAGGTTTTTGAATATTAGTGACTTCGGGATTAGCCAGAGTTTCAATCCTGAAACTATGTTGGTAGGAGAGGGATGGTGGGATGAGAAGAGAAACATGTTGTGTGTAGTGGCTTGTCATTTCATAGGCAAGTCATCATCCTTGGCTGGTACTCATGTGGGTGATTGCTCCATAAGATTAAGATTGAGATTCCCCTCAACTTGGTCAATCAACAGCACTAGTAGCATAGTGGGCCAAATTTGGAGCAACAAGAGTACTAATGATCCAAGCCACTTCAAGATGATAACATTTAGAAATGGTGATGATCGTTGGGTGGGAATTCAAGCTAAAAAGTATGAGTATAGCCTATTAGACAGAGTGAAGAAGTCGTGCCCAAAACACAAGCCTGTTAAGAACAAGAAGAGAACATATCCAGATGCCTATTCTTATGACATGAGATTTGACATGTCAGTTAGAGAGTCTAACAAAAGAGTAGCATGGGGATATTCAGAACCCTTGTCTGTTGGTAATGAGGTCTCTACCTTAGGTAAGAATGTCTCAAGCTCCTTTGTAGAAGTTAATGAGGTAAAAAACAACAGTGGTGGTTTGTTTAACATTAGCTACAAAATCTCACTGTGGTTTAATTCAACCAGTGACAAGAATTCCCTGTTAAACCAGTCCTCTTGGTCGGTGAGGATTTCAGCAGAAGGAGTTTATGATGCTGGAGCAGGAAGCTTGTGTATGGTAGGTTGCCGTGATCTTCACTCAAACTCTCTCTCACCAGTAGCTCATTCTGTGGATTGTGGGATTGTGGTGAAGTTTCAGTTACCACCATTAGAAGCAAAAAGTGGAATCTTCATTAAGGGAAGCATTGAAAGCACACGCAAGAAGTCAGATGCTCTTTACTTCCAACCTTTGGACTTATCTTCATCTGCATTTTACACTGAAGCAGCTAAAAAAATAGTTTGGAGAATAGATATAGAGACCATCATGGTTCTGATATCTACCACTCTAGCATGTGTTTTTGTGGGATTGCAGCTCTTCCATGTGAAGAGACACCCCAATGTGCTCCCCTTGATCTCACTTATTATGATGTCAATGCTTACTTTAGGCCACATGATACCCCTTGTTCTAAACTTCGAAGCACTTCTTACTCAAAATCCTAACAACAAAAACTTTGTATTTGGAAATGTTGGGTGGCTTGAAGTGAATGAAATAGCTATAAGGCTAATCACCATGGCGGCTTTCTTGTTGCAATTTCGACTCCTTCAACTAACTTGGTCATCAAGAAAGAGTGATGAAAGCATAAATGGCCTCTGGATTGCTGAGAGAAAGGCTGCTTATGTCACTTTTCCATTGTATGCTGCTGGCTTATTGATTGCATTGCTGTTTAAGTTGAAGAGAGATGGAGATGAGGTTGCTGTGCTTACTCCATTGAACCAACATCATTCTTCATCTTGGGAGAACTTAAAATCTTATGGTGGTTTGGTATTGGATGGCTTTCTCTTGCCACAGATTATCCTAAACCTGTTCTCAAACATGAAGGACAATGTTCTTTCATGTTCTTTTTACTTTGGAACTACTTTCGTGAGATTGTTGCCTCATGCCTATGATCTTTACAGGACTCATAATTTTGCTCGCGTAGATAATGGATCATACTTCTATGCGGATCCAAGTGCAGATTTTTACTCCACTGCTTGGGATATTGCCATTCCATTGGGAGGTATCTTGGTGGCTATCATTATCTACTTGCAGCAACGTTTTGGTGCCCATTGTATTCTTCCTCAAAGATTCAAAGGGTCTAATGTGTATGAAAAGGTGCCTGTGGTTGCTGAATCAGAAGCTGAAGTAGAGACAAACAACTTGTAA 2757 0.4012 MNSLHSILFFLLTISSFYLVSSFTSTPSYKDHCGSIVPESTPNGLIHNSSPFDDYYRGYFTGGDSIIDGGTSFNQYSFAFEPMHTRATKSSDLFKVEGSASLTSSISYYHVGNVSYGERLRYERQRRYRRSHVNFKLDGFWSESSGKVCMVGTGNGYSKEGKYLNLDVVFKLDNVFNASNITSLVSGTLESLRKDWSHFEPISVVIFPKANYKYTLDSIKVANEFSSGSDDTTKGGLPLNSMSFCSHSLSRAIRNLQLEFSPECNSFKNCTPISESSGQLPSVVSLKGIECSITNNKHRLRVLMRFLNISDFGISQSFNPETMLVGEGWWDEKRNMLCVVACHFIGKSSSLAGTHVGDCSIRLRLRFPSTWSINSTSSIVGQIWSNKSTNDPSHFKMITFRNGDDRWVGIQAKKYEYSLLDRVKKSCPKHKPVKNKKRTYPDAYSYDMRFDMSVRESNKRVAWGYSEPLSVGNEVSTLGKNVSSSFVEVNEVKNNSGGLFNISYKISLWFNSTSDKNSLLNQSSWSVRISAEGVYDAGAGSLCMVGCRDLHSNSLSPVAHSVDCGIVVKFQLPPLEAKSGIFIKGSIESTRKKSDALYFQPLDLSSSAFYTEAAKKIVWRIDIETIMVLISTTLACVFVGLQLFHVKRHPNVLPLISLIMMSMLTLGHMIPLVLNFEALLTQNPNNKNFVFGNVGWLEVNEIAIRLITMAAFLLQFRLLQLTWSSRKSDESINGLWIAERKAAYVTFPLYAAGLLIALLFKLKRDGDEVAVLTPLNQHHSSSWENLKSYGGLVLDGFLLPQIILNLFSNMKDNVLSCSFYFGTTFVRLLPHAYDLYRTHNFARVDNGSYFYADPSADFYSTAWDIAIPLGGILVAIIIYLQQRFGAHCILPQRFKGSNVYEKVPVVAESEAEVETNNL 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01094 918 Pfam Protein of unknown function (DUF2921) 30 890 IPR021319 -
Cca10g01094 918 PANTHER DUF2921 FAMILY PROTEIN 1 915 - -
Cca10g01094 918 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 915 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01094 Cca-Chr10 13848338 13851334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01094 - - gmx:102664055 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01094 10 13848338 13851334 Cca10g01094 10 13848338 13851334 ECH