Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01091 ATGCAAAAACACCCTTCTTCTCTAATGCTTTCCATCACCATGGAAGAAGAACAAGAACCAAACCTGATCAAGCATGGCTCCAAAGAGAACCACAACAAGACCATGCACATGCACACACCAAATCCAAATCCATCATCTCAAACAATCATGAGATTGGCCTCACTTGCCATCAGCTTCAACGTGCGGTTGAAATCATCCGACATGCCTGTCCACATGCAAGAACATGCTTTGCACCACACAAGATTGCTCTTCCCCCTTCACCCTCCTTCTCCAAAGCCAACAAACACTCACATAGCTAGAGCTCTCAAGAAGGAATTTGATACGAAATATGGATTGGCTTGGCACTGTGTGATAGGGAAGAGTTTCGGATCGTTTGTGAGTCATACTAGTGGTGGGTTCATCTACTTCTCAATTGACTCACTTTCAGTTCTTCTCTTCAAAACTGAGGTTCACTTAGTCGAGCAACCACCTttttaa 477 0.4403 MQKHPSSLMLSITMEEEQEPNLIKHGSKENHNKTMHMHTPNPNPSSQTIMRLASLAISFNVRLKSSDMPVHMQEHALHHTRLLFPLHPPSPKPTNTHIARALKKEFDTKYGLAWHCVIGKSFGSFVSHTSGGFIYFSIDSLSVLLFKTEVHLVEQPPF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01091 158 Pfam Dynein light chain type 1 61 148 IPR001372 GO:0007017|GO:0030286
Cca10g01091 158 PANTHER DYNEIN LIGHT CHAIN 28 155 IPR001372 GO:0007017|GO:0030286
Cca10g01091 158 SMART Dynein_light_2 56 148 IPR001372 GO:0007017|GO:0030286
Cca10g01091 158 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 55 148 IPR037177 GO:0007017|GO:0030286
Cca10g01091 158 PANTHER DYNEIN LIGHT CHAIN 28 155 - -
Cca10g01091 158 SUPERFAMILY DLC 58 148 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01091 Cca-Chr10 13827226 13828162 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01091 K10418 - gmx:100790593 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01091 10 13827226 13828162 Cca10g01091 10 13827226 13828162 ECH