Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01076 ATGCTGGCCATTTTCCACAAGGCTTTTGCTCATCCACCTGAAGAGCTCAACAGTCCTGCATCTTACAAAGGCTCCAAGAAGCCTAAGGTTCCCCAGGAAACTCTCAATGATTTCCTTTCCCATCATCCTCACAACACTTGCTCTATGAGCTTTGGTCATGCTGCTGTGCTAGCTTATGTCCGTCCTGATCAACCTTTCTCTATCCATCAAAGGTTGTTTTGTGGGGTTGATGACATATACTGTCTCTTCTTGGGGAGCTTGAACAATTTATCCCTACTCAACAAGCAATATGGTTTATCAAAGAACACTGATGAGGCCATGTTTGTGATTGAAGCTTACAAGACACTTCGTGACCGTGGTCCATACCCGGCAGATCAAGTTGTCAAGGATCTTGATGGCAGCTTTGCCTTTGTTGTCTATGACAGCAAAATTGGCAGTGTATTTGCAGCACTGGGTTCTGATGGAGGAGTGAAGTTGTATTGGGGTATTGCAGCTGATGGATCTGTGGTGATCTCTGATGATCTTGAAGTCATAAAAGAGGGTTGTGCCAAATCCTTTGCTCCCTTTCCAACAGGGTGTATGTTTCATAGTGAAGGAGGTTTGATGAGCTTTGAGCATCCAATGAACAAGTTGAAGGCAATGCCAAGAGTGGACAGTGAAGGGGCCATGTGTGGGGCAAACTTCAAAGTCGATAAGTTTTCCAGAGTCAACAGCATTCCTCGAGTGGGAAGTCAATCCAATTGGATGGAATGGGACCAGCATTAA 765 0.451 MLAIFHKAFAHPPEELNSPASYKGSKKPKVPQETLNDFLSHHPHNTCSMSFGHAAVLAYVRPDQPFSIHQRLFCGVDDIYCLFLGSLNNLSLLNKQYGLSKNTDEAMFVIEAYKTLRDRGPYPADQVVKDLDGSFAFVVYDSKIGSVFAALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKLKAMPRVDSEGAMCGANFKVDKFSRVNSIPRVGSQSNWMEWDQH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01076 254 PANTHER ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS 1 249 IPR044828 -
Cca10g01076 254 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 49 198 IPR029055 -
Cca10g01076 254 PANTHER BNAA08G14100D PROTEIN 1 249 - -
Cca10g01076 254 Pfam Aluminium induced protein 2 230 IPR024286 -
Cca10g01076 254 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 29 205 IPR029055 -
Cca10g01076 254 SMART DUF3700_2 2 230 IPR024286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01076 Cca-Chr10 13478953 13480521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01076 - - gmx:547601 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01076 10 13478953 13480521 Cca10g01076 10 13478953 13480521 ECH