Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01072 ATGGCTTCAAAGTTGTTACTCATTACTGTCTTCGTTTTTGACTTGATTGCTTTTGGACTCGCTGTCGCTGCTGAGCAGAGAAGAAGCACTGCTAGAATAGTGCAGGACAGGGACCAGAATTATAATTACTGTGTCTATAACTCTGACATAGCAACTGGCTATGGTGTTGGAGCATTTTTGTTCCTCTTGGTTAGTCAAGTCCTAATAATGGTGGCGAGTCGATGCTTCTGTTGTGGGAAGCCTCTAAGCCCTGGAGGCTCAAGGGCATGTGCAGTTGTCCTTTTCATAATCTGCTGGGTGTTTTTCCTCATAGCTGAGGTGTGTTTGTTGGCTGGATCAGTGGAAAATGCCTATCACACCAAGTACAGGACCCTCTTTATGGAAAATCCCCCTTCTTGTGAAACAGTTAGGAAGGGAGTCTTTGCTGCTGGTGCTGCTTTTGTGTTCTTCACTGCCATAGTTTCTGAATTCTACTACATCAACTACTCAAGTGCCAGGGAAAGCTTCCAACCTTACAGCGGCGGTGAGACCGGCGTAGGTATGGGAACCTACAAATGA 558 0.4588 MASKLLLITVFVFDLIAFGLAVAAEQRRSTARIVQDRDQNYNYCVYNSDIATGYGVGAFLFLLVSQVLIMVASRCFCCGKPLSPGGSRACAVVLFIICWVFFLIAEVCLLAGSVENAYHTKYRTLFMENPPSCETVRKGVFAAGAAFVFFTAIVSEFYYINYSSARESFQPYSGGETGVGMGTYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01072 185 PANTHER - 1 185 - -
Cca10g01072 185 PANTHER OS07G0462200 PROTEIN-RELATED 1 185 - -
Cca10g01072 185 Pfam Protein of unknown function (DUF1218) 58 153 IPR009606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01072 Cca-Chr10 13387279 13390062 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01072 - - gmx:100305647 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01072 10 13387279 13390062 Cca10g01072 10 13387279 13390062 ECH