Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01071 ATGGACCCTAACACTTGTCTTGATCATGCCCTCTTTCAGCTCACTCCAACCAGAACCAGGTGTGACCTTGTTGTTGTTGGTGGAGGTGTGAGTGAAAGACTGGCTTCTGGGCTGTTAGAACCATTTCTTTCTCACCTTAAGAGTGCCAAGGATCAGATTTCCAAAGGTGGCTATTCCATTACTCTGCGTGCACTTGGTGGACATGCCCCCTGGTTCACCAAAGCCACCCTCCAAAGGTTTGTTAGATTTATTAGCACTCCAGAAGTTCTAGAGAGGTTTGTCACAATAGAAAAGGAGATTGTGCAGATTGAAGGGTCGATTCAGTCAAGTGAGAGGAGCAATTTGGTGGCAGAAGCAGCAGAAGATGGGCGTGTTAGAAGGTCAACAACTTCCTCTAAGCTTAAAGATGAACCAGCCGGAAGCAATCAAGATGGATATGAAGAAAACTCCAGGGTTCGCCTTCAACGTGTTCTAGATAATCGTAAAGCTATGCTTTGCAAAGAACAAGCAATGGCCTATGCCCGTGCTTTAGTTGCAGGATTTTACCCAGAATCTGTGGATGATCTTATATGTTTTGCTGATGCATTTGGAGCTTCACGTTTAAGGGAAGCATGCATAAATTTCTTAGAGCTGTGCAAACAAAAGAATGAAGACAAGCTCTGGATAGATGAGATAGCAGCCATGCAGGTGGCTGCACAGCCCGAATTGCCATATTTGAGGACATCTGGAATCATACTTGCTGGTGAAGATGATACAAGCAGTAAACTAAATGGCATAGTTGATGCCTCAATTTCTGAGTCAACTCCAAGTCATGCAAGTTTGGACATAGGCCAAGATTATGGCTTGCCAACATCAGGTCAAACACCATCAACAGATGGAAGAGCTCAAATACCAATGTCCTGGCCAAACCATCTCCCTCAGTACATTCACAACTTTCAGGGTCATGCATTTCAACAAATGCCCCCATACCAAGGGTACCTCTATCCTGGGATGCAGGTTCCCTCTTCATATTATCCGGGGAATATGCAATGGCCTCCAAATGTGGAAGACTCTCATATTGTTCATGACCAAGAGAAGGATTATCATAAATCATCATACaagaagaagaagaagaagaaACATTCTCAAGTCCTGGAGCAGTCCGAAGAAGATAGCTCAACAGCATCCTCCAACTCTAGTTATGAGAGTGATTCAGATGACCATTCAAGGCAAGGTAAAAAGCACTCTTCCACAGAACATATGCACAAAAAGAAGCATGGAAAGAAGTCCTCAAGGAAAGTAGTTATACGCAATATTAACTATATAACCTCTAATGGAGATGGTGAAAAGGGTAGTGTCACAGAGGGGAGTTTGTCTAATGAGGAAGAATTTATCAAGGGAGATTCCCTGAAACAACAGGTAGAGGAAGCAGTAGGATCACTGGAGAGAAGACACAAGTCAAGTTCCCATCACCATAAGAAACACAATAGTGCAAAGCACCCTAGCATGCTAAATGGATCAAATGATGCTGATTCCAATGTTGTAAAAGGCAATAACAACTGGGATGCTTTTCAGAATCTTCTTTTGAGAGATGATGATTCTACTCTTGATACAGAAAAGGAGCCTGTGAAGTTTCAGGAGGATTATATTGTAAATCAGAATTTTGAGGATGGAAGGTCAAATGCATTTAACCACAAAGCAGACGTTAGTAAAACTCGAGTAGTTTCAAATGATTCCTTTGTTGTGGCAGAGAGGGGATTCAGCAGTGAGGGTCAAAATCGCATTGATAACTTTAAGGAAGGAATGGATGCACCTTCATTTGTGAATAAAAGTAATGGTACAAATGAGGAGATGTTGTTTTCTCGCAGAATTGATGAATCTGCTAGCTATTCTATGTCCACTCTATCTGTGAATGGCCCAAAATCTTCCCTCACTAAATGCCAGAAAGAAGAGGATTGGTTCACTATCAATCAATCTGATAAACCAGGAAATGAGGATCAAAACCGAGATTTCAGCATGTTTAATGGCATTTCTGTTTCATCATCAGCTACTGATTCTTTACATGTAGAGAAAAACAAGAAAGACATTATGACTGATGACTCTTTCATGATTCAAGCTCGACCATCTGAAGATCAATTTAATTCTCAGTCGGCAGTTGATCTAGGCTTGGTTTCAGACATTGTTGGGGCTACTGAATTCATGAACAGAACACAAGAAGGTTCACACAATAAGACTGAAACCATAAATTCTCATGAGCCAGATGATCTCTTCATGGTTCTTGACCGTGATTCAGCTGCACAGCAAAGTTCGGCACCGTGGAGCATTGAAATGGATTATGAGAATAACATTTCTACAAATGAAGCTAATAAAAAGCTTTCTGAAGTTGAAACAGACAAAAACCAACCATCTAAGCATGAGGGTCCTGATACAAAAACAACTAGAGTGCAAAATGGGAAAGTTTCAAGTAAAGAGGCAAAGTCTAAGGCTCTAAATGCATCTCTTGGGAAAAGCAAACCCGATGTCACTTCAAGAAGCAAAGCATCCCCTGGAAGCAGAACTAGAGTTGTAAAGAGCAAATCTGAGAAGGAAGAGGAAACTAGAAAGAGAAAAGAAGACTTGATGATTCAGCGGCAGAAAAGAATTGCGGAAAGAAGTGCCTCTAAGAAAACTGGAATAGAAACTAGGACATCCTTGACTTCTACAAAGAAAGAAAATCCTAAGATACATCCATCCAATGAGGAGACTAAGAAATTGAACAAACCTGTCCTCAGGAATTCCACCATTAAACGCCTTGCAACTACCCGAGTGAGTCAGCAGAAAGTTTCACCAAATCAAGCAAAACCAGTTCCAACTAAGAAACCGTCCTTGAAGGCAAATGGTGTACCATTGCAGAAAAAGACTACTGGCACCGAAAAGAAGAAGCAGGGACCAAAAGAGGTCAAATCTTCAAGTCACAAAGAAGACGTGAAGAAAACAAATGGGAAAGTTCTTGATGGCACAAATGGCCTGGCTAAAAATGTAATGGAAGTCTCAGCAGCATTGCCAATGAACTCTGGTGTCATGCAATCTGTTGAACCAAAAAACAGTAATCTTGGTTTGACAAACAATGGAGAAAGAGAGCAAGTGCATGGTAATGTTGATCCACCTTTGCCAAATCATGATCACTTGTTGAGAGGAAATCAGTCAAAAGGTGAAGAAGCACCAAACAAGTTATCTTCACTTCCTGGTGATAACAAACCTCAACATATAACTGATGTGATCACAAGTCCTACAACTGCATTACCTAGCAAACCCCTAACAGTTTCTGCTGTGAATTCAAAGGTTAATCAAGAAATAGATGAAAGTGATGCTATCTTGCTTAAAGTCACTGAGAAACAAATCACTACTACCCCTCCACCCAGTAACCAAGTGATGCCAGAACCAGTCCACTCTAGGAAGAAATGGAACAGTGATGAAGACTCTTCAAAAGCGGCAAAAGGATTTCGTAAGCTTCTATTCTTTGGAAGAAAAGGCTGA 3495 0.4097 MDPNTCLDHALFQLTPTRTRCDLVVVGGGVSERLASGLLEPFLSHLKSAKDQISKGGYSITLRALGGHAPWFTKATLQRFVRFISTPEVLERFVTIEKEIVQIEGSIQSSERSNLVAEAAEDGRVRRSTTSSKLKDEPAGSNQDGYEENSRVRLQRVLDNRKAMLCKEQAMAYARALVAGFYPESVDDLICFADAFGASRLREACINFLELCKQKNEDKLWIDEIAAMQVAAQPELPYLRTSGIILAGEDDTSSKLNGIVDASISESTPSHASLDIGQDYGLPTSGQTPSTDGRAQIPMSWPNHLPQYIHNFQGHAFQQMPPYQGYLYPGMQVPSSYYPGNMQWPPNVEDSHIVHDQEKDYHKSSYKKKKKKKHSQVLEQSEEDSSTASSNSSYESDSDDHSRQGKKHSSTEHMHKKKHGKKSSRKVVIRNINYITSNGDGEKGSVTEGSLSNEEEFIKGDSLKQQVEEAVGSLERRHKSSSHHHKKHNSAKHPSMLNGSNDADSNVVKGNNNWDAFQNLLLRDDDSTLDTEKEPVKFQEDYIVNQNFEDGRSNAFNHKADVSKTRVVSNDSFVVAERGFSSEGQNRIDNFKEGMDAPSFVNKSNGTNEEMLFSRRIDESASYSMSTLSVNGPKSSLTKCQKEEDWFTINQSDKPGNEDQNRDFSMFNGISVSSSATDSLHVEKNKKDIMTDDSFMIQARPSEDQFNSQSAVDLGLVSDIVGATEFMNRTQEGSHNKTETINSHEPDDLFMVLDRDSAAQQSSAPWSIEMDYENNISTNEANKKLSEVETDKNQPSKHEGPDTKTTRVQNGKVSSKEAKSKALNASLGKSKPDVTSRSKASPGSRTRVVKSKSEKEEETRKRKEDLMIQRQKRIAERSASKKTGIETRTSLTSTKKENPKIHPSNEETKKLNKPVLRNSTIKRLATTRVSQQKVSPNQAKPVPTKKPSLKANGVPLQKKTTGTEKKKQGPKEVKSSSHKEDVKKTNGKVLDGTNGLAKNVMEVSAALPMNSGVMQSVEPKNSNLGLTNNGEREQVHGNVDPPLPNHDHLLRGNQSKGEEAPNKLSSLPGDNKPQHITDVITSPTTALPSKPLTVSAVNSKVNQEIDESDAILLKVTEKQITTTPPPSNQVMPEPVHSRKKWNSDEDSSKAAKGFRKLLFFGRKG 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01071 1164 MobiDBLite consensus disorder prediction 357 427 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 1116 1148 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 806 821 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 408 426 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 478 492 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 1012 1034 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 960 987 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 893 913 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 1012 1090 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 472 510 - -
Cca10g01071 1164 PANTHER COP1-INTERACTING PROTEIN 7 1 1163 - -
Cca10g01071 1164 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 1163 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 785 805 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 829 847 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 381 395 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 269 296 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 134 148 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 919 942 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 785 993 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 848 883 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 493 510 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 114 148 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 117 133 - -
Cca10g01071 1164 MobiDBLite consensus disorder prediction 1067 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01071 Cca-Chr10 13354452 13362866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01071 - - gmx:100815598 1805.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01071 10 13354452 13362866 Cca10g01071 10 13354452 13362866 ECH