Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01063 ATGGCTTCGCTCCACAGCACCGTCGCTCCACGCACCTTCTTGCCGTCCATTGccaagcccaagcccaagcccaagccTGATGCTACTCATGCTAAATTTCCGGCGGCGAGATTTTCACGGAACCGCGTTTTCTCGGGAAGCAAACGCGCGGTGGCGGCGAACTCGGCGGCGGAGGAGTTCGACGTGATATCGGTGCAGAGCGGCGACATTACCGACCAGCAGGAGGGCGTGGTGGTGAGCCGCGTCGATATGGAAGGCGGAGACGGCGAATTGGCGACGCAGGTGAGCGGATTCGGAGCGAACGAAGGATTGTTGTCGTTGGAAGGtttttcttcttcttcttcggcgtcttcttctGCGTTGGTTGGGAGCGAGAGCGAGGAGGATATGGAGAAGCTAATTGATAGAACTATCAACGCTACGATTGTGCTCGCCGCTGGTACTTTCGCCATCACCAAACTTGTCACTATTGATAGTGATTACTGGCATGGATGGACGCTATTTGAGATACTCAGATATGCGCCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTCAAGACAAATCCGGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCTCTTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCCCTGTTTGAGTTTGACCGTGCACGGATGCTCAGATCTGGGCTTGCTGGTTTTACTCTTCATGGTTCTCTTTCTCATTACTATTATCAGTTCTGCGAGGAGCTATTTCCTTACGAAGAATGGTGGGTAGTTCCTGCTAAAGTTGCCTTCGATCAGACTGTATGGTCAGCAATTTGGAACAGCATTTATTATACGGTTGTTGCAGTTCTGCGTTTTGATCCTCCAATCGCTATTTTTAATGAATGGAAGGCAACGTTTTTTCCCATGCTGACGGCGGGTTGGAAACTATGGCCATTTGCCCATCTCATTACTTATGGAGTGATACCAGTTGAGCAAAGACTTCTCTGGGTGGATACCATAGAGCTTATTTGGGTGACCATACTATCCACATTTTCAAATGAAAAATCAGAAGCAAGAAACTCAGAGTCTATAGTGCCGACAGAAGTGAAATCCACCACATCTGCTCATCCTCCCGAGGAGTAA 1128 0.4672 MASLHSTVAPRTFLPSIAKPKPKPKPDATHAKFPAARFSRNRVFSGSKRAVAANSAAEEFDVISVQSGDITDQQEGVVVSRVDMEGGDGELATQVSGFGANEGLLSLEGFSSSSSASSSALVGSESEEDMEKLIDRTINATIVLAAGTFAITKLVTIDSDYWHGWTLFEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSLGDWIAQCFEGKPLFEFDRARMLRSGLAGFTLHGSLSHYYYQFCEELFPYEEWWVVPAKVAFDQTVWSAIWNSIYYTVVAVLRFDPPIAIFNEWKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTIELIWVTILSTFSNEKSEARNSESIVPTEVKSTTSAHPPEE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01063 375 MobiDBLite consensus disorder prediction 354 368 - -
Cca10g01063 375 Pfam Mpv17 / PMP22 family 292 344 IPR007248 GO:0016021
Cca10g01063 375 MobiDBLite consensus disorder prediction 354 375 - -
Cca10g01063 375 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 88 374 IPR007248 GO:0016021
Cca10g01063 375 MobiDBLite consensus disorder prediction 1 34 - -
Cca10g01063 375 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 88 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01063 Cca-Chr10 13146748 13150967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01063 182 350 Miscellaneous Gene Families AT2G14860 25.444 3.77e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01063 K13348 - gmx:100805057 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01063 10 13146748 13150967 Cca10g01063 10 13146748 13150967 ECH