Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01058 ATGGTGATGCTAATGATGAACCTTGTAAAGTGGGTTTGCTTTGTTTTGGTTATTTATTTGTTTTTGGTGAATGGTTCATTTGCCGCATACATTCCTCGTGATAATTATCTAATTGCTTGTGGTTCATCCCAAAGCATTACTTTCCAAGACCGCACTTTTGTTCCTGATTCTCAGCATTCTTCATTGGTGTTGAAAACCCAGAATTCTGTTGTTGCTAGTTCCAATTCTAGTGTCACATTCCCTATATACCAATCAGCTAGGATTTTCACTGAGAAAGCTTCTTATAGATTTGAGGTTGAGAAAGGTAGGCACTGGCTTAGGCTATATTTTTCCCCTCTTCCCAACTCTGCACATAATTTGACCGCTGCGGCTATAACAGTGGCCACTGATGATTTTGTTCTCTTGTGCAACTTCACCTTTAGGAACTACAATGGTTCTTATATGTTTAGGGAGTATGCCATCAATGTTACCTCTGATACCTTGACTGTTACCTTCATTCCTTCAAATGGTTCAGTGGCCTTTGTCAATGCAATTGAAGTTGTGTCAATGCCAAATGACTTATTTGTTGATCAGGCAGTGGCCCTTGACCCAGCTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTACCGCTTAAACATAGGAGGTCCCTTGCTCACACCCCAAAATGACACCCTTGGAAGGACTTGGGAGAATGATCAGAAATACCTTCGTCTAAACAGTTCAGTAACTAAAGTGTCAGTAAACCCTTCCAGCATTAAGTATCCGGCAGGTGTTACGCCTGAGACGGCACCAAATTGGGTATATGCCACTTCTGAAGCCATGGGGGATGCAAATGTAGCCAATTCAAATTTCAACATTACTTGGGTCTTTACTGTGGATCCAAACTTCTCCTATTTTATCCGGGTGCACTTTTGTGATATCATTAGCAAGTCTCTCAACACGTTAGTGTTCAATCTATTCATAAATTCTGACATAGCTCTTGGAAGCTTTGATCTCTCATCCATAACAAATGATTTGGCTGTGCCTTACTACAAGGACTTTGTTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTTAGTGTTGGTCCTGATACAATGGCTGATATCACAAATGCTACTATGAATGGACTGGAGATTATAAAGATCAGCAATGCATTCAATAGCTTGGATGGACTTTCTTCAGTTGAAAGTCTCCTTCCTAGTTCACCATCAAGCAAAAGCAAGATGGGAGTAATAGTTGGTTCTTGTGTTGGGGCAGTGGCTGCCGTAGCTTTGGTTGGTTTGTGTTATTGCTGCTTGGTGAGATACAAATCAAAGTCTACTCAACAGGGCCATTCTTGGCTGCCTCTGCCTTTACCTTCTTTATATGGAAACTCTCAGACCATGACAAAAATGTCATCAACTTCACAGAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCTTCATCAAATCTTGGCCGGTTATTCACTTTCCAAGAgatcctaaatgcaaccaacaaatttgatgagaagctgctccttggtgttggtggctttggcaggCTTCAAGAGACCTCATCAGCACTCATGGAACCAGAAGATAACAGCACAAACCACATTATTGGAATTCAGTTGACTCGTCTTGAGCCTTTTGATAACAGTGTTAGTATGAATGCTGGGGGAAATTCTTTAATGGGCGATGATGCAGAAGATGTTTCCACAAGTGCAGTGTTCTCACAATTGGTACATCCTCGCGGCAGATGA 1758 0.3999 MVMLMMNLVKWVCFVLVIYLFLVNGSFAAYIPRDNYLIACGSSQSITFQDRTFVPDSQHSSLVLKTQNSVVASSNSSVTFPIYQSARIFTEKASYRFEVEKGRHWLRLYFSPLPNSAHNLTAAAITVATDDFVLLCNFTFRNYNGSYMFREYAINVTSDTLTVTFIPSNGSVAFVNAIEVVSMPNDLFVDQAVALDPAAPFNGLSELAFETVYRLNIGGPLLTPQNDTLGRTWENDQKYLRLNSSVTKVSVNPSSIKYPAGVTPETAPNWVYATSEAMGDANVANSNFNITWVFTVDPNFSYFIRVHFCDIISKSLNTLVFNLFINSDIALGSFDLSSITNDLAVPYYKDFVSNASADSNILTVSVGPDTMADITNATMNGLEIIKISNAFNSLDGLSSVESLLPSSPSSKSKMGVIVGSCVGAVAAVALVGLCYCCLVRYKSKSTQQGHSWLPLPLPSLYGNSQTMTKMSSTSQKSATASCISLASSNLGRLFTFQEILNATNKFDEKLLLGVGGFGRLQETSSALMEPEDNSTNHIIGIQLTRLEPFDNSVSMNAGGNSLMGDDAEDVSTSAVFSQLVHPRGR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01058 585 PANTHER OS07G0166700 PROTEIN 22 521 IPR045272 GO:0004714|GO:0006468
Cca10g01058 585 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 524 577 - -
Cca10g01058 585 Pfam Malectin-like domain 38 386 IPR024788 -
Cca10g01058 585 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 22 521 - -
Cca10g01058 585 Gene3D - 207 389 - -
Cca10g01058 585 Gene3D - 35 184 - -
Cca10g01058 585 PANTHER OS07G0166700 PROTEIN 524 577 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01058 Cca-Chr10 13058683 13061226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01058 28 518 Receptor kinase-like Gene Family AT2G21480 40.918 6.52e-115 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01058 - - gmx:100803996 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01058 10 13058683 13061226 Cca10g01058 10 13058683 13061226 ECH