Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01045 ATGCTAGAAGGCAAGGCAGTGATTGGGGAGACCGACATGCTTCAAACCATGCAACAGGATGCCCTTAATTTGGCATCCAAAGCATTGGATTTCTTCGATGTCACTGAGGCCATTGACATAGCCAGGTTTATCAAGAAGGAATTTGATAGGATTCATGGACCTGCAGGATGGCAATGCATTGTAGGCACTGATTTTGGTTCGTTTGTGACCCATTGTTGTGGCTGTTTTATCTATTTCTGTATAGGCAACTTGGCAATTCTGCTTTTCAAGGGTTCCGCGGCTCCATAG 288 0.4514 MLEGKAVIGETDMLQTMQQDALNLASKALDFFDVTEAIDIARFIKKEFDRIHGPAGWQCIVGTDFGSFVTHCCGCFIYFCIGNLAILLFKGSAAP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01045 95 Pfam Dynein light chain type 1 5 90 IPR001372 GO:0007017|GO:0030286
Cca10g01045 95 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 91 IPR037177 GO:0007017|GO:0030286
Cca10g01045 95 PANTHER DYNEIN LIGHT CHAIN 1 94 - -
Cca10g01045 95 SUPERFAMILY DLC 1 91 IPR037177 GO:0007017|GO:0030286
Cca10g01045 95 SMART Dynein_light_2 1 91 IPR001372 GO:0007017|GO:0030286
Cca10g01045 95 PANTHER DYNEIN LIGHT CHAIN 1 94 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01045 Cca-Chr10 12814795 12815685 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01045 K10418 - gmx:100779040 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01045 10 12814795 12815685 Cca10g01045 10 12814795 12815685 ECH