Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01011 ATGGTTGAAGCAAAATGGTGCCACAAGGGTTACATTCCAACATATGATGAATATAAAGCTAATGGAATCTTAACATCTTGTTGTCCTCTATTGTTCACATCAATGATATGTCTTGGAGAATTTGCAACAAAGGATGTGTTGGATTGGATTTTTAGTGATCCAAAAATCCTTCAAGCTTCATCAATTATTGGCAGAGTCATGGATGACATGGCCTCACATAAGTTTGAGCAACAAAGAGTACATGTCGCCTCATCGGTGGAATGTTGCATGAACCAATATGGAATTTCAGAAGTAGAAGCCTATAAGCTTATTCGCAAGGACATTGAAGATTGTTGGAAGGTTATAAATGAAGAGTACTTCAATTCCTACAATATCCCCAAATCTGTGCTTGATTGTGTAGCTAATTTTGCACGTATGTCAGAGTTTTCATATGAAAATCGTCAGGATAAATTCACAAATGGAGAATTATTAAAAGATGATGTTTCTTCTCTACTTTTGAATCCTATTAGCCTCGAAGAATGCAAGTAG 528 0.3598 MVEAKWCHKGYIPTYDEYKANGILTSCCPLLFTSMICLGEFATKDVLDWIFSDPKILQASSIIGRVMDDMASHKFEQQRVHVASSVECCMNQYGISEVEAYKLIRKDIEDCWKVINEEYFNSYNIPKSVLDCVANFARMSEFSYENRQDKFTNGELLKDDVSSLLLNPISLEECK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01011 175 Gene3D Farnesyl Diphosphate Synthase 1 170 IPR008949 -
Cca10g01011 175 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 1 169 - -
Cca10g01011 175 Pfam Terpene synthase family, metal binding domain 1 113 IPR005630 GO:0000287|GO:0010333|GO:0016829
Cca10g01011 175 PANTHER OS04G0344100 PROTEIN-RELATED 1 169 - -
Cca10g01011 175 SUPERFAMILY Terpenoid synthases 1 170 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01011 Cca-Chr10 12131193 12131886 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01011 - K15803 gmx:100781367 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01011 10 12131193 12131886 Cca10g01011 10 12131193 12131886 ECH