Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00997 ATGGAGGAAGCACTTGAGACGATGATGAACAAAGTTCAAATTTCTTCTTCTCCTGCAACATACTGTGTTACTGGAGGCAAAGGTTATCTTGGTTCATGGCTTGTGGAGACTCTTCTTGAAAGAGGCTACATTGTTCATGCCACTGTTAGAGATCCTGAAAAGTCGCTACACTTTCTGCCACTGTGGAAGGGAAATGACCGATTGAGAATTTTCAAAGCGGATTTGAATGAAGAAGGAAGTTTCGATGAGGCCGTGAAAGGTTGTGATGGCGTTTTTCATGTTGCAGCTTCAAAGGAATATAAGGTGGATGAGACAGAAAACATTGAGGCTTATGTTCAAGCAAATATAATTGATCCTGCAATCAAAGGAACCATAAACGTTCTAAAGTCCTGCTTGAATTCCAATTCTGTGAAAAGGGTTGTTTACACATCTTCAATGAGTACCATGAGTGCTAAAGACAGCAATGGGAAGTGGAAACCTGTTGTTGATGAATCTTGCCAAATCCAAACTGAACATATGGTGAAAACACAACCAATTGGGTGGGTTTATGCACTTTCAAAGCATCTAACAGAAGAGGCAGCATTTAAGTTTGCTAAAGAGAATGGCATTGACCTTGTGTCAGTCATAACAACCGCTGTTGCAGGCCAATTCTTCACTGCTAATAACGTACCACCAAGTGTTAAAGTCCTACTGTCACCATTAACAGGTGAACCTGAGTTCTTCAAGCTACTATCTTCTGTAAATGCACGAATGGGGTCAATTTCTGCTGTTCACATTGAAGATATATGCAGTGCACACATATTCCTAATGGAGCATTCTAAAGCAGAAGGTCGATACATATGTAGCAGCCAATGTTTTCCGATCTCTATGTTGGCTAATCTTCTTGCCAAAGAGTATTCCTACTCAAACAAGAAAAAGATTGCTGAGAAAAATTGTGATAAAGTTCCTTCTGACATTTCCTCAAAGAAATTAAAAGATTTGGGTTTTTGCTACAAGTATGGGCTTGAAGATATAATCCATCAGACAATTATTTGTTGCCAAGATTATGGTTATTTACCTCCAATTATACAATAG 1074 0.3901 MEEALETMMNKVQISSSPATYCVTGGKGYLGSWLVETLLERGYIVHATVRDPEKSLHFLPLWKGNDRLRIFKADLNEEGSFDEAVKGCDGVFHVAASKEYKVDETENIEAYVQANIIDPAIKGTINVLKSCLNSNSVKRVVYTSSMSTMSAKDSNGKWKPVVDESCQIQTEHMVKTQPIGWVYALSKHLTEEAAFKFAKENGIDLVSVITTAVAGQFFTANNVPPSVKVLLSPLTGEPEFFKLLSSVNARMGSISAVHIEDICSAHIFLMEHSKAEGRYICSSQCFPISMLANLLAKEYSYSNKKKIAEKNCDKVPSDISSKKLKDLGFCYKYGLEDIIHQTIICCQDYGYLPPIIQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00997 357 Gene3D - 11 353 - -
Cca10g00997 357 Pfam NAD dependent epimerase/dehydratase family 22 275 IPR001509 -
Cca10g00997 357 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 17 343 - -
Cca10g00997 357 CDD FR_SDR_e 21 329 - -
Cca10g00997 357 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 17 343 - -
Cca10g00997 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 352 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00997 Cca-Chr10 11742296 11744693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00997 16 343 Miscellaneous Gene Families AT4G27250 55.090 3.63e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00997 - - ccaj:109815084 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00997 10 11742296 11744693 Cca10g00997 10 11742296 11744693 ECH