Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00980 ATGAAAGGTTCTAAGTGTAGTGTTTTGGGTTTCAACATCGAGCATGCACTTGGTTGCGTTAAGCGCATAAGAACAAAGTCTAATAAGCAAAGGCAGATTTTTCCCACCCCAGATCCTTCCTTCAGCACAGTGAACAGTCCAGAGTCTTTCCCCATTgagaagagaaggagatcagagatagtgagagagagaagagagagcaaagagCTTGCACAGCCAGAGCCACCAAACTTTGAGATAGGGTGGAAGAGGACCAAAGAGATCAACTTAGAGAGGCCAATAGGGCATGTCATAGCTGATTTTCTTGAGAAGCTGGAGACCCTCATGGGGAAGGAGTATGGTTCCACAGAGCTTCTGGCAAAGGTGGGAGAGATTGTGGCTGAGAGGGCAAGAGAGGAGGCTGAGGTTCTCAGAGATGAAGGCAAAGTGGAGGGAGAATGGTGA 444 0.4257 MKGSKCSVLGFNIEHALGCVKRIRTKSNKQRQIFPTPDPSFSTVNSPESFPIEKRRRSEIVRERRESKELAQPEPPNFEIGWKRTKEINLERPIGHVIADFLEKLETLMGKEYGSTELLAKVGEIVAERAREEAEVLRDEGKVEGEW 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00980 147 PANTHER OS01G0676200 PROTEIN 26 144 - -
Cca10g00980 147 MobiDBLite consensus disorder prediction 28 56 - -
Cca10g00980 147 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00980 Cca-Chr10 11533698 11536870 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00980 - - gmx:100811126 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00980 10 11533698 11536870 Cca10g00980 10 11533698 11536870 ECH