Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00978 ATGGCGGCGGCGACGAGCTCCGACAGCTGCTGCACGCGGTGCCTGAGCTTCCTGATAACGACGGGGATGGCGGCGCTCTTCATCTGGCTGAGTCTCCGCGTGGACGAGCCAAGGCTCTACCTCAAACAAATCTACGTTCCTTCCCTCAACAAAACCCTAAACCCTAAACCCCACAACAACACCGTCTTCTTCACGCTGCACCTCGTCAACAACAACAAGGACAAGGGCATCCAATACGACGACGTTCTCCTCTCCTTCGCGCGCTTCGCCTCTCCCAACGCCACGCGCCCACTCGGCAACGCCACCGTCGCCGGCTTCTACCAGGGCCACGGCAAGAAGGCCAAGAAGCGCGCCTCCCTCGCCGCCGCCGGGAACCTCACGGCGCCCGTCGACGGCAGGGTTTTCTACCGCGTGGATTTCACCACCGCGGTCAAGTACAAGATCCTCTTTTGGTACTCCAAACGGCACCGTTTGTGGGGAGGGGCCAATGTCGAGATCGACGCTCGCTCCGGGGAGAAGGTCCACCGGAAAGATGTCAGGCTCGGCGGGAAGTCGCCGCCGGTGATCCCGTCCGGCGCACCGGGGACCCCTCCTGGCTATCGTGCGCTGCCTTGCGTTGTTGCTCTTTTCTTGCTCGCTCAGttgacttga 651 0.6144 MAAATSSDSCCTRCLSFLITTGMAALFIWLSLRVDEPRLYLKQIYVPSLNKTLNPKPHNNTVFFTLHLVNNNKDKGIQYDDVLLSFARFASPNATRPLGNATVAGFYQGHGKKAKKRASLAAAGNLTAPVDGRVFYRVDFTTAVKYKILFWYSKRHRLWGGANVEIDARSGEKVHRKDVRLGGKSPPVIPSGAPGTPPGYRALPCVVALFLLAQLT 216
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00978 216 PANTHER NDR1-LIKE PROTEIN 7 194 - -
Cca10g00978 216 PANTHER OS05G0367900 PROTEIN 7 194 IPR044839 GO:0098542
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00978 - - vun:114183543 271.166
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00978 10 11514052 11515154 Cca10g00978 10 11514052 11515154 ECH