Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00977 ATGGATTATGAACCTCCATTTTTAGAGATCTACAAGATCCTTCTACAAGGCTCACTCGATGTTGATGTTGGTATTAACACAAGTGACAAATCCGAGTGGTGTGAGCTTCCTCTGATTGATCTTTCCAAGCTAAGTCTTGGCAAGCATGAGAGGGTGGAGTGCATGGAAGAAATCAGTGGAGCTGCCAGAACATGGGGTTTTTTCCAGGTTGTGAATCATGGTGTTTCACAAGAGTTGCTGCAGAGTCTGAGGTGTGAGCAAATGGAAGTGTTCCGCAACCCTTTTGCACACAAGTCTAGTGAGAATTTCTTGAATTTACCAGCCAGAAGTTACAGGTGGGGCAACCCTTCTGCCACAAACTTGAGGCAAATTTCATGGTCAGAAGCCTTCCACATGTTTCTTCCAGACATAGCTAGGATGGACCAGCACCAAAGTCTGAGATCAACAATTGAAGCTTTTGCATCTGTGGTTGCTCCTCTAGCAGAAAGCTTAGTGCAAATTCTAGCTCAGAAAGTGAACATCAAATTCAGCTATTTCCAAGAAAACTGTTCAGCAAACACAAGCTTTCTTCGCCTAAACAGATATCCACCATGTCCATTCTCTCCAAGGTTCTTTGGCCTCTTACCTCACACTGATTCTAGTTTCCTCACTATAGTACACCAGGACCAGATTGGGGGGTTGCAACTAATGAAAGATGGAAATTGGGTTGGTGTCAAACCTAACCCCCAAGCTCTTGTTGTTAATATTGGTGATTTATTCCAGGTAATGATCTCAACACTCTTGCTTTATTCTTATAATAGAATATTAATATGA 813 0.4231 MDYEPPFLEIYKILLQGSLDVDVGINTSDKSEWCELPLIDLSKLSLGKHERVECMEEISGAARTWGFFQVVNHGVSQELLQSLRCEQMEVFRNPFAHKSSENFLNLPARSYRWGNPSATNLRQISWSEAFHMFLPDIARMDQHQSLRSTIEAFASVVAPLAESLVQILAQKVNIKFSYFQENCSANTSFLRLNRYPPCPFSPRFFGLLPHTDSSFLTIVHQDQIGGLQLMKDGNWVGVKPNPQALVVNIGDLFQVMISTLLLYSYNRILI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00977 270 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 186 270 IPR005123 -
Cca10g00977 270 Gene3D - 16 263 IPR027443 -
Cca10g00977 270 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 24 261 - -
Cca10g00977 270 Pfam non-haem dioxygenase in morphine synthesis N-terminal 36 133 IPR026992 -
Cca10g00977 270 SUPERFAMILY Clavaminate synthase-like 26 256 - -
Cca10g00977 270 Pfam 2OG-Fe(II) oxygenase superfamily 188 259 IPR044861 -
Cca10g00977 270 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 24 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00977 Cca-Chr10 11481359 11483262 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00977 35 269 Glycosyltransferase AT5G59530 26.971 2.14e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00977 - K04125 gmx:100790757 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00977 10 11481359 11483262 Cca10g00977 10 11481359 11483262 ECH