Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00972 ATGGATTATGAACCACCATTTCTGGAGACCTACAAGACCCTTGTGCAAAAACACGTAGGGGATTCAAGGAACGACTACTCCTGCTCTATAGTGGAGAGATGTGATATACCTTTGATCGACCTAAGTCGGTTAAACCTTGATTATGATCAGAGAGACGAATGCATGAACGAAATCGCAGAAGCTGCAAGAGAATGGGGTTTCTTTCAAGTGGCTAATCATGGAATTTCACAGGAGCTTCTGGAGAGCCTGCAGATTGAGCAAAAGAAAGTGTTCTATCAACCTTTCTTGAACAAGTCAGCACAAGCTAGTTTCTCTTCTTTATCTGCCAGAACTTACAGGTGGGGAAATGCATTTGCCACTAATCTCAGACAACTGTCATGGTCTGAAGCCTTTCATTTCTATCTCACGGATATTTCAAGGATGGACCAAGATCAAAGTCTGAGATCGAGTCTTGAAGCTTTTGCAACAAGAATGTTCACCCTTGGGGAAAGCTTGGCGGAAGTACTAGCGTGCAAATTGAACACAAAATCCAGCTATTTCCATGAGCATTGCTTGCCAAAAACTTGTTTCATTCGACTGAATAGATATCCTCCATGCCCTATATCGTCAAAGGTGCATGGCCTGTTGCCTCACAGTGACACTAGTTTTCTTACCATCGTTCATCAGGACCAGGTTGGAGGATTGCAATTGATGAAAGATGGAAAATGGGTTGGTGTCAAGCCTAATCCACATTCTCTAGTCGTCAATATTGGTGACTTATTTCAGTCTGAATTCTTGTTTGGTAGCAGCATATGTATGGGAAAACGTGATCACCAGTCCAATAGAAATGATTAG 834 0.4233 MDYEPPFLETYKTLVQKHVGDSRNDYSCSIVERCDIPLIDLSRLNLDYDQRDECMNEIAEAAREWGFFQVANHGISQELLESLQIEQKKVFYQPFLNKSAQASFSSLSARTYRWGNAFATNLRQLSWSEAFHFYLTDISRMDQDQSLRSSLEAFATRMFTLGESLAEVLACKLNTKSSYFHEHCLPKTCFIRLNRYPPCPISSKVHGLLPHSDTSFLTIVHQDQVGGLQLMKDGKWVGVKPNPHSLVVNIGDLFQSEFLFGSSICMGKRDHQSNRND 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00972 277 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 8 255 - -
Cca10g00972 277 Pfam non-haem dioxygenase in morphine synthesis N-terminal 36 136 IPR026992 -
Cca10g00972 277 Gene3D - 9 259 IPR027443 -
Cca10g00972 277 Pfam 2OG-Fe(II) oxygenase superfamily 191 255 IPR044861 -
Cca10g00972 277 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 187 277 IPR005123 -
Cca10g00972 277 SUPERFAMILY Clavaminate synthase-like 30 255 - -
Cca10g00972 277 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00972 Cca-Chr10 11388379 11392828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00972 31 255 Glycosyltransferase AT5G59530 29.614 3.66e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00972 - K04125 gmx:106795437 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00972 10 11388379 11392828 Cca10g00972 10 11388379 11392828 ECH