Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00970 ATGGAGGAGCTATTCGTAGCGATACTGTCGATGCTTCTCGTGGCGTCGTTGATCCCACTCTATCTATGGAAACGCCGTCACGATTCTCAATCTCCCTCTCACCGCGACGAACCTCCCCAGGCTCCGCGGAGAGAAACCGTGGCGCGCGCAACCGCCACTCGCCGCATGCGTCGCCGACCTGCTGCATCTGGAGCTAGCACTTCGTCGGATCCTCCAGCGGCACAAGAAGAATCTGCTGGTGAGAGTGATGATGATGCTGCTGAGGCTAAACCATCAAAGAAAAAGGAAATTAAAAAGCAAGAGAGGGAAGCACGGCGTCAGGCTGAGGAAGCTTCACGAGAGTCAAGGCAGGCTAAACAAGATCGTTATTCAGAAATACGGAGGTTGAAGGATGAGGAGCGTGAGGCACGGGAGCGTATGCTGGAAGAGGAAGCCAGAGCTCAGAAAGCCAAGGAAGAGGAGGCTGCTGCATTAGAGTTTGAGAAGTGGAAAGGTGAATTTTCAGTTGATGATGAAGGTACCCTTGAGGAAGTGCAGGATAGTACTGAAGACTTGCTAGCCAACTTTGTTGACTATATAAAGAAGCACAAATGTGTTCCATTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGGAATGTATCAATCGCATCACATCTCTGGAAAGCTTGGGTCGGCTTTCGGGTGTTATGGATGATAGAGGGAAATTTATTTACATTTCCCAAGAAGAGATGAAATCTGTTGCTGATTATATTAAGCGGCAAGGGAGGGTTAGCATTTCCCACTTAGCAAGTAAATCAAACCAGTTCATAGATTTAGAGCCCAAAGTCCAGTACTCTGAGGAAATAAATATTGTGGAGGAGATAACTGTCAACTGA 882 0.4762 MEELFVAILSMLLVASLIPLYLWKRRHDSQSPSHRDEPPQAPRRETVARATATRRMRRRPAASGASTSSDPPAAQEESAGESDDDAAEAKPSKKKEIKKQEREARRQAEEASRESRQAKQDRYSEIRRLKDEEREARERMLEEEARAQKAKEEEAAALEFEKWKGEFSVDDEGTLEEVQDSTEDLLANFVDYIKKHKCVPLEDLAAEFKLRTQECINRITSLESLGRLSGVMDDRGKFIYISQEEMKSVADYIKRQGRVSISHLASKSNQFIDLEPKVQYSEEINIVEEITVN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00970 293 SMART DDRGK_2 85 273 IPR019153 -
Cca10g00970 293 MobiDBLite consensus disorder prediction 28 130 - -
Cca10g00970 293 Pfam DDRGK domain 91 272 IPR019153 -
Cca10g00970 293 Coils Coil 123 161 - -
Cca10g00970 293 SUPERFAMILY "Winged helix" DNA-binding domain 180 249 IPR036390 -
Cca10g00970 293 Coils Coil 90 121 - -
Cca10g00970 293 MobiDBLite consensus disorder prediction 28 52 - -
Cca10g00970 293 MobiDBLite consensus disorder prediction 84 130 - -
Cca10g00970 293 Gene3D - 184 241 IPR036388 -
Cca10g00970 293 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 99 290 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00970 K23344 - gmx:100810584 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00970 10 11334030 11339792 Cca10g00970 10 11334030 11339792 ECH