Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00966 ATGAGTACCAAAATCAAAGCTCCTTCTTCCACCAGTGAGTGTGACTCTTCAGAGGAGAGTGGTTGGACTAAGTACTTTGAGGATTTCTTTAACGACCATAATGTTGATGATCAGAAATGTTCTATGTCTTTCTCTGGTATTGACTCCACCTCCTTTGCCTCTGATGCTGCTTCCTTGGCTGCTACCAAAAAATTAACTTATAGCACACAAGCTGAGGAATCTAGTTTGAAGAAGAGAAAGAAGATCAAAACAGCTTTTGATGATGCTTTGGAAGATACTGCAAGTTCTCCTATCAAAGGCCCCAAGGAAAAAGGAAACACCTCAGGAGAAAGAGATGAAAGGAAAGAAGTGTATTTTAATGGGAGGGATAATGACCACGCAGAACTGAAGAAGAAAGGCCTTTGCTTAGTTCCTTTGTCGATGATAGTGAAATATCTATAG 441 0.4014 MSTKIKAPSSTSECDSSEESGWTKYFEDFFNDHNVDDQKCSMSFSGIDSTSFASDAASLAATKKLTYSTQAEESSLKKRKKIKTAFDDALEDTASSPIKGPKEKGNTSGERDERKEVYFNGRDNDHAELKKKGLCLVPLSMIVKYL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00966 146 MobiDBLite consensus disorder prediction 92 119 - -
Cca10g00966 146 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 5 103 - -
Cca10g00966 146 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 107 146 - -
Cca10g00966 146 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 5 103 IPR039280 GO:0010089
Cca10g00966 146 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 107 146 IPR039280 GO:0010089
Cca10g00966 146 MobiDBLite consensus disorder prediction 104 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00966 Cca-Chr10 11259912 11261329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00966 - - gmx:102669408 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00966 10 11259912 11261329 Cca10g00966 10 11259912 11261329 ECH