Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00723 ATGGCATCTAGAGGTCTCAAAACTTGCTTGTGCATGTTCCTACTCTTTTTGATCATTGTTATAGTTGTGATTGTGACTTTGTCTCTTACCATGTTCAAACCCAAAAGTCCCAATATCACTGTCTACCCTGTTGGCCTCGAACACTTTGACTATTCCGTTCTATTCAATTCGTCCATAACAAGTGTGAATCTACCTATGATAATCAATGTACAAAATCCAAACTATGGAAGCTTCGAGCACAAACACTTCGTTAGTTATGTAAAATTTCATGATAGCATTGTGGGTGAAGTTCCAATGGAGGCTGAGAAAGTTGCGGCACGTAGCCAGATTAATATGACCACTCATGTAGATTTAATGATTGGAAACTTAATTCATGATCCCAATTTTATCTCAGATGTTACAATTGGAACTTTGAATTTCACATCAACATTTACGCTCAAAGGGAAAGCGAGTGTGCTCAAGATTTTCAAAGTGAAGGCCTATGTTCATAACTCATGTGACATCTCTCTTCATATATTGTCCAAGAAAGTTAATTCCACATGCATATCCAGCCTCAAGCTTTGA 564 0.3759 MASRGLKTCLCMFLLFLIIVIVVIVTLSLTMFKPKSPNITVYPVGLEHFDYSVLFNSSITSVNLPMIINVQNPNYGSFEHKHFVSYVKFHDSIVGEVPMEAEKVAARSQINMTTHVDLMIGNLIHDPNFISDVTIGTLNFTSTFTLKGKASVLKIFKVKAYVHNSCDISLHILSKKVNSTCISSLKL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00723 187 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 3 186 - -
Cca10g00723 187 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00723 Cca-Chr10 8217997 8218897 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00723 - - gmx:100800442 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00723 10 8217997 8218897 Cca04g01030 04 11248716 11249182 PCT