Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00697 ATGGCTACCACTGCATCATCCCCTTTCAAGAAAATTCAGATTCAAAGGGATGACACTACATTTGACGCATATGTTGTTGGAAAAGAGGATGCTCCTGGAATTGTTGTGATTCAGGAGTGGTGGGGTGTGGATTTTGAAATTAAGAACCATGCTGTGAAGATTTCTCAGCTTGGTACTGGGTTTAAGGCTCTTATTCCAGATCTGTATAGAGGAAAGGTTGGTCTGGATACTGCTGAAGCTCAGCATTTGATGGATGGTCTTGATTGGCCAGGCGCTGTGAAGGATATCGCTGCTTCAGTTAACTGGCTTAAAGCAAATGGTTCGAAGAAGGTTTGGCATTGTTTGTGTTTTCAAGATGAAAAATTCTCTATTATTAAAAAGGCTCTGACATCTACAGTACAGTTCATTGTGCTTTTCTCATCAGGCAGTAGTTGCAGAAGGTTGGTGTAA 450 0.4156 MATTASSPFKKIQIQRDDTTFDAYVVGKEDAPGIVVIQEWWGVDFEIKNHAVKISQLGTGFKALIPDLYRGKVGLDTAEAQHLMDGLDWPGAVKDIAASVNWLKANGSKKVWHCLCFQDEKFSIIKKALTSTVQFIVLFSSGSSCRRLV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00697 149 SUPERFAMILY alpha/beta-Hydrolases 9 111 IPR029058 -
Cca10g00697 149 Gene3D alpha/beta hydrolase 11 120 IPR029058 -
Cca10g00697 149 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 4 140 - -
Cca10g00697 149 Pfam Dienelactone hydrolase family 21 110 IPR002925 GO:0016787
Cca10g00697 149 PANTHER BNAC04G12290D PROTEIN 4 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00697 Cca-Chr10 7807438 7811031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00697 K01061 - gmx:100790249 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00697 10 7807438 7811031 Cca10g00697 10 7807438 7811031 ECH
Cca10g00697 10 7807438 7811031 Cca04g00999 04 10862951 10867984 PCT