Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00637 ATGGCGTTTGGTCAAGTTACGATGTCAGCACTTGTTTTGGCATTAGCTGTAGCCAGAATTAGCCCCTCAGCATGCCAAACGGTAGAGGGCAAAGTCTCTTGCACTGACTGCACTCACCACTACGATTTATCTGGCATGAAGGTCTCAGTGAAGTGTGAAGGTGTGAAAAAGGTGGCTGTGGCGACCACAGAAGATAACGGCTTCTTCAAAGTGAAACTTCCCTCAGACCAAACAAACCCTCCCTCTTCGAACTGCTTTGCTAAACTTGTTGGAGGGCCAGATCAGGTTTATGCCTCTAACAAAGACCAACTCTCCCAAATTGTAAAGGGAAATGACAAGAACACTTACACCATCTCCACTCCTCTTACTTTCTTCACATCCTGTCCTCAAAACACAGAATGCAATAAGGATGCCAACGTCTTCGCTTCATCCAAAACCTTTGATCTTCCTCTGCCTCCGGAATGGGGTTTGCCACCAAGTAGCTACTATGTTCCTTTCTTCCCCATCATCGGAATACCTTAG 522 0.4636 MAFGQVTMSALVLALAVARISPSACQTVEGKVSCTDCTHHYDLSGMKVSVKCEGVKKVAVATTEDNGFFKVKLPSDQTNPPSSNCFAKLVGGPDQVYASNKDQLSQIVKGNDKNTYTISTPLTFFTSCPQNTECNKDANVFASSKTFDLPLPPEWGLPPSSYYVPFFPIIGIP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00637 173 Pfam Pollen protein Ole e 1 like 28 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00637 Cca-Chr10 6950722 6954215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00637 - - ccaj:109817346 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00637 10 6950722 6954215 Cca10g00637 10 6950722 6954215 ECH
Cca10g00637 10 6950722 6954215 Cca04g00936 04 9960261 9961782 PCT