Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00602 ATGTCGGAACCACCGTTTAGACCACGAGAGAAACTTATTGAGAAGCAAAAGTATTTCCAGAATATCCATAAGCACACATACTTAAAAGGACCATATGACAAGATTACATCTGTTGCAATACCACTTGCACTAGCAGCATCTTCGTTGTATCTGATTGGAAGAGGGATCTACAATATGTCACATGGAATAGGGAAGAAAGAATGA 204 0.3873 MSEPPFRPREKLIEKQKYFQNIHKHTYLKGPYDKITSVAIPLALAASSLYLIGRGIYNMSHGIGKKE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00602 67 Pfam Cytochrome c oxidase subunit VII 10 62 IPR039297 -
Cca10g00602 67 PANTHER CYTOCHROME C OXIDASE SUBUNIT 7 1 67 IPR039296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00602 Cca-Chr10 6581135 6583367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00602 - - gmx:100800807 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00602 10 6581135 6583367 Cca10g00602 10 6581135 6583367 ECH
Cca10g00602 10 6581135 6583367 Cca04g00892 04 9414915 9416767 PCT