Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00112 ATGAAAGAAAAGGAAGCAAACCCTCTGCACCTTAAGTCTGTTAACCACATCTCCCTTGTCTGCACATCAGTGGACCAATCCATCAACTTCTACCAAAACCTTCTCGGATTTTTCCCCATCAGGAGACCAGGCTCATTTGATTTTGATGGAGCATGGCTATTTGGATACGGAATTGGAATCCATTTGCTGCAAGCTGAGGATCCAAACAAGGTTACAAGAAAAACAAAAATTAATCCCAAGGATAATCATATATCTTTTCAGTGTGAAAACATGGGAGCAGTGGAGAATAAGCTTGAGGAGATGAAGATTGAGTACGTGCGTGCAACGGTTGAAGAAAGTGGAATCCAAGTGGATCAGTTATTTTTTCACGACCCAGATGGATTCATGATTGAGATTTGCAACTGTGATAGCCTTCCTGTGATTCCCATAGCAGGTGAGATGGTAAGGTCATGCTCCCGAGTGAACTTTCAGATGCTTCAGCAGCCAAAGATACATCAAATTGTTAAGCTGGAAAATTAA 519 0.4162 MKEKEANPLHLKSVNHISLVCTSVDQSINFYQNLLGFFPIRRPGSFDFDGAWLFGYGIGIHLLQAEDPNKVTRKTKINPKDNHISFQCENMGAVENKLEEMKIEYVRATVEESGIQVDQLFFHDPDGFMIEICNCDSLPVIPIAGEMVRSCSRVNFQMLQQPKIHQIVKLEN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00112 172 Coils Coil 91 111 - -
Cca10g00112 172 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Cca10g00112 172 PANTHER BNAC05G11680D PROTEIN 1 168 - -
Cca10g00112 172 CDD VOC_like 14 132 - -
Cca10g00112 172 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 134 IPR029068 -
Cca10g00112 172 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Cca10g00112 172 PANTHER - 1 168 - -
Cca10g00112 172 Gene3D - 5 137 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00112 Cca-Chr10 1121550 1122824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00112 - - gmx:100305695 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00112 10 1121550 1122824 Cca11g00167 11 2027465 2029360 PCT