Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02855 ATGGCATATCCAGCTAAGAAGTTCATCAACGACCCCAACGATGTTGTTACTGAATACATTCAAGGTCTTGTGCACACTTATCCTGCTCTCCAATATTTAGATGGCTTTCCTCAGGTGAAGGTTGTGTTACGTGCCGATGTTTCATGTACAACATACGATAAAGTTTCAATCATATCAGGGGGAGGAAGTGGCCATGAGCCTGCTCAAGCTGGATATGTTGGAGAAGGAATGCTGACGGCAGCCATCTGTGGGGACATCTTTGCCTCTCCCCCAGTCGATTCAATTCTAGCTGGGATACGAGCTGTGACTGGTCCTATGGGATGTCTTCTGATTGTCACGAACTACACCGGTGATCGTTTGAACTTTGGTTTGGCTGCTGAGCAAGCAAAGTCTGAAGGTTACAAAGTAGAGACTGTAATTGTTGGGGATGATTGTGCCTTACCTCCACCTCGAGGAATTGCTGGAAGAAGAGGTTTGGCAGGCACTATTCTGGTTCATAAGGTTGCAGGAGCTGCTGCCGCCGCTGGCCTTTCTCTCATTGATGTTGCTGCAGAAGCAAAACGTGCATCTGAAATGGTGGGCACAATGGGGGTTGCATTATCCATTTGCACACTTCCTGGTCAGGTTACATCAGATCGTTTGGGCCCTGAAAAGATGGAACTGGGTCTTGGAATTCATGGAGAACCTGGTGCAGCTGTGGCAGATCTTCAGCCTGTAGATGGAGTGGTTTCTCATGTTCTTATGCAAATATTGTCTCCGGAAACAAACTATGTTCCTATTACACGAGGTTGTAGAGTGGTTCTCATGGTCAATGGGTTAGGTGGCACTCCTTTAATGGAACTAATGATTGTGACAGGAAAGGCAGTCCCAAAATTGCAGCTGGAACACGGGCTGGCTGTTGATAGGGTTTATACAGGGTCATTTATCACTTCTCTCGATATGGCAGGTTTCTCAATTTCTATCATGAAGGCTGATGCATCTATTCTTCAACGATTAGATGCTGCAACTAAAGCTCCGTATTGGCCAGTCACGGAAGATGGTAATCGCCCACCTGCCAAGATTCCTGTTCCAGTTCCACTGTCTCAATCAGCTAAGAGTGACAAGCCACAGAGTCAGCCAGTATCACTAAATAAGCAAGGTCAGGTTCTTCAGGAAGCCATTGAAGCTGCTGCAAATGCAATTATAAATCTCAAGGACAGTCTAAATGAATGGGATAGCAAAGTTGGTGATGGTGACTGTGGATCAACTATGTATAGAGGTGCAAAAGCAGTTCTGGAGGACATCAAAAATTATCCTCTGAATGATGCTGCAGAGACTGTTGGTGAAATTGGATCGTCAATTGGACGAGCTATGGGAGGAACAAGTGGGATCATATATACAATTTTTTGCAAGGCAGCATATACACAGCTGAAAGAAAATTCTCACTCTGGTGTCACGCCAAAACAATGGGCTGAAGCACTTGCGGCTTCCATTGCTGCTGTTAGTAAATATGGGGGTGCTAGTGCTGGTTATAGAACATTGCTAGATGCCCTAATTCCAGCATTGTCAGTTCTTCAAGAGAGACTAAATTCTGGTGATGATCCTTCCATTGCCTTTCTTCTCTCGTCTGAAGCTGCATTAGCTGGAGCTGAGTCAACCAAGAACATGCAAGCTCAGGCTGGGCGTTCAACTTATGTGTCGGGAGAGATTCTTTCATCAGTTCCTGACCCTGGTGCAGTGGCTGCTGCCTCGTGGTACAGAGCTGCGGCTGTAGTTGTCCAGCAAAAAACCAATATGAAGTTGTTTGATGATCAAAGTTAG 1800 0.4578 MAYPAKKFINDPNDVVTEYIQGLVHTYPALQYLDGFPQVKVVLRADVSCTTYDKVSIISGGGSGHEPAQAGYVGEGMLTAAICGDIFASPPVDSILAGIRAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGIAGRRGLAGTILVHKVAGAAAAAGLSLIDVAAEAKRASEMVGTMGVALSICTLPGQVTSDRLGPEKMELGLGIHGEPGAAVADLQPVDGVVSHVLMQILSPETNYVPITRGCRVVLMVNGLGGTPLMELMIVTGKAVPKLQLEHGLAVDRVYTGSFITSLDMAGFSISIMKADASILQRLDAATKAPYWPVTEDGNRPPAKIPVPVPLSQSAKSDKPQSQPVSLNKQGQVLQEAIEAAANAIINLKDSLNEWDSKVGDGDCGSTMYRGAKAVLEDIKNYPLNDAAETVGEIGSSIGRAMGGTSGIIYTIFCKAAYTQLKENSHSGVTPKQWAEALAASIAAVSKYGGASAGYRTLLDALIPALSVLQERLNSGDDPSIAFLLSSEAALAGAESTKNMQAQAGRSTYVSGEILSSVPDPGAVAAASWYRAAAVVVQQKTNMKLFDDQS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02855 599 Coils Coil 383 403 - -
Cca09g02855 599 ProSiteProfiles DhaK domain profile. 11 341 IPR004006 GO:0004371|GO:0006071
Cca09g02855 599 Gene3D - 377 587 IPR036117 GO:0004371|GO:0006071
Cca09g02855 599 ProSiteProfiles DhaL domain profile. 381 584 IPR004007 GO:0004371|GO:0006071
Cca09g02855 599 PANTHER TRIOKINASE/FMN CYCLASE 1 589 - -
Cca09g02855 599 SUPERFAMILY DhaL-like 376 582 IPR036117 GO:0004371|GO:0006071
Cca09g02855 599 TIGRFAM dak_ATP: dihydroxyacetone kinase 6 582 IPR012734 GO:0004371|GO:0005524|GO:0006071
Cca09g02855 599 SUPERFAMILY DAK1/DegV-like 6 344 - -
Cca09g02855 599 Pfam DAK2 domain 407 582 IPR004007 GO:0004371|GO:0006071
Cca09g02855 599 Gene3D Dihydroxyacetone kinase; domain 1 16 191 - -
Cca09g02855 599 Pfam Dak1 domain 21 339 IPR004006 GO:0004371|GO:0006071
Cca09g02855 599 MobiDBLite consensus disorder prediction 343 374 - -
Cca09g02855 599 SMART Dak2_2 407 584 IPR004007 GO:0004371|GO:0006071
Cca09g02855 599 PANTHER DIHYDROXYACETONE KINASE 1 589 - -
Cca09g02855 599 Gene3D Dihydroxyacetone kinase; domain 2 194 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02855 Cca-Chr9 54134683 54143899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02855 - - gmx:100801639 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02855 09 54134683 54143899 Cca09g02855 09 54134683 54143899 ECH