Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02851 ATGGACGTGGCAGTGACTGCCGTCCGGTCGCCGGCGATCGCCCTTGGAAGACCGATCAACGCCTCCGCCTCAGCTCGGTTCGCTTCTACTTTAGGATTTTCCAGAAAGGTATGCTTCACTTCATTATCTATCCCCAAGCAAGGTCGCAGGAATAGAAGAGGATTAGTAGTTAGAGCAGCATCGTCATCTGAATCCGATGGCACTGCGAAGATTGCTCCTCTTCAGTTGGAGTCCCCAGTTGGGCAGTTTCTTTCTCGGATTTTGAAAGATCATCCACATCTCGTGCCTGCTGCCGTCGACCAGCAGCTTGAGCAGCTTCAAACTGACCGCGATGCTGATCAACAAAAGGAAGAGCCCTCTGCTTCAGGCACTGATTTAGTTTTGTACAGGAGAATTGCTGAGGTGAAGGCTAATGAAAGGAAGAAAACTCTGGAAGAGATCTTGTATGCATTGGTGGTGCAGAAGTTCATGGATGCTAATATTTCTTTGATACCCTCCATAATCCCAGATCAGTCTGGTAAGGTTGATCTGTGGACAAACGAAGATGGTAAACTTGAACAGCTTCACTCACATGAAGCATATGAGATGATTCAAAACCACTTGAGTCTCATTCTGGGTACCAAAGTAGGAGATTTAACATCAATAGCTGAAATCAGCAAATTCAGGGTAGGGCAAGTCTATGCAGCATCGGTGATGTATGGTTATTTTCTTAAGCGAGTTGACCAAAGGTTCCAGCTGGAGAAGACAATGAAAATTCTTCCAAATGCAACAGAAGAAGAGAATAGTGTTCATCAAACTACAATGGACAATGCAAGTCCGAATATTGAAGAGGACAATTCTCAAGTGATGTCTCATCCTGAAGTATCTACCTGGACTGGTGGTGACGTCAGTCCTAGTGGATTCAGCTATGGTATAAAGCCCACCAGGTTGCGTAGCTATGTGATGTCCTTTGACGGTGATACCCTACAAAGATATGCGACAATTAGATCCAAAGAAGCTGTCAGCATCATTGAGAAGCACACAGAGGCATTGTTTGGAAGACCTGAAATTGTTGTAACACCTGAGGGGGCAGTCTCTAAGGATGAAAACATCAAAATTAGCTTTGGTGGTTTAAAGAAACTTGTTTTAGAGGCTGTGACTTTTGGGTCTTTTCTCTGGGATGTTGAGAGCTATGTGGACTCTAGGTACCATTTTGTCTTGAACTGA 1206 0.4469 MDVAVTAVRSPAIALGRPINASASARFASTLGFSRKVCFTSLSIPKQGRRNRRGLVVRAASSSESDGTAKIAPLQLESPVGQFLSRILKDHPHLVPAAVDQQLEQLQTDRDADQQKEEPSASGTDLVLYRRIAEVKANERKKTLEEILYALVVQKFMDANISLIPSIIPDQSGKVDLWTNEDGKLEQLHSHEAYEMIQNHLSLILGTKVGDLTSIAEISKFRVGQVYAASVMYGYFLKRVDQRFQLEKTMKILPNATEEENSVHQTTMDNASPNIEEDNSQVMSHPEVSTWTGGDVSPSGFSYGIKPTRLRSYVMSFDGDTLQRYATIRSKEAVSIIEKHTEALFGRPEIVVTPEGAVSKDENIKISFGGLKKLVLEAVTFGSFLWDVESYVDSRYHFVLN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02851 401 Pfam Protein of unknown function (DUF760) 127 250 IPR008479 -
Cca09g02851 401 PANTHER EXPRESSED PROTEIN 1 401 IPR038925 -
Cca09g02851 401 PANTHER EXPRESSED PROTEIN 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02851 Cca-Chr9 54104283 54106839 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02851 - - gmx:100793300 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02851 09 54104283 54106839 Cca09g02851 09 54104283 54106839 ECH