Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02835 ATGGCTTCAGGTAATGTTTTCGACGAGCGTGGCATTCAGAAATCCTACTGGGTTCAGCATTCCGCCGATTTGTCTGTCGAGGCAATGATGCTCGATTCCAATGCAGCTAATCTCGACAAGGAAGAGAGACCCGAGGTACTTTCCCTATTACCGGCATATGAAGGAAAATCGGTAGTAGAGCTTGGAGCAGGTATCGGAAGGTTTACTGGTGAATTGGCTCACAAAGCTGCTCAGTTGCTTGCTGTGGACTTCATTGATAGTGCAATCAAGAAGAATGAAAGCATCAATGGACACCACAAGAATGTCAAATTTTTGTGTGCTGATGTCACATCTCCAAATTTGCATGTTTCTGAAGGATCTGTTGATGTGATTTTCTCCAATTGGTTACTTATGTATCTTTCAGATAATGAGGTTGAAAATTTAGCTGAAAGGATGATCAAATGGTTAAAAGATGATGGATATATATTTTTCAGAGAATCTTGTTTCCACCAATCTGGGGATTCAAAGAGGAAATACAACCCTACTCACTACAGGGAACCCAGATTTTACACCAAGGTATTTAAAGAGTGCCACATGACTGATGATACTGGGAATTCCTATGAATTTTCTCTTGTGGGCTGTAAGTGCATTGGAGCTTATGTTCGAAATAAGAAGAACCAAAACCAGATTTGCTGGATATGGCAGAAAGTTAGGTCACATGATGATAGGGGTTTCCAGCGGTTCTTGGATAGGGTTGAATACAGCCACAAGAGTATTTTACGATATGAGCAAATGTATGGCCATGGCTTTGTGAGCACCGGTGGACTTGAAACGACAAAGGAATTTGTGGCAAAGCTGGAACTAAAGTCTGGTCAGAAAGTTCTGGATGTTGGTTGTGGTGTTGGGGGAGGTGATTTCTACATGGCTGAAAATTTTGGTGTTGAGGTTGTTGGCATTGACCTCTCCATAAATATGATTTCTCTTGCTATTGAACGTGCTATTGGACTGAAATACGCTGTTGAATTTGATTGCGCGGATTGCTATAAAAAAACATATCCTGAGAATACATTTGATGTAATCTACTCTCGGGACACAATGCTACATGTTGAAGATAAACCAACATTATTCAGATCATTTTACAAGTGGTTGAAGCCTGGAGGAAAAATTCTAATTACAGATTACTGCAAAAGTGCGGGAAGTCCATCTTCAGAATTTGCTGAGTACATTAAAAAAGGAGGATATTATCTCCATGAAATGAATGCTTATAGGCAGATGCTCGAGGATGCTGGATTTGATGATGTCATTGCTGAGGATCGAACTGATCAGTTCGTGAAAGCACTAGAGCAGGAGTTAGAAGCCCTTGAGAACAAGAAGGACGATTTTATTAGCGACTTCAGTCAGGAAGACTACGATGAAATTGCTGAAAGATGGAAGGCAAAGCAGACCAGGGGTGCATCTAGAGAGCAGATGTGGGGCTTAATAATCGATGAAACACATCACAATGCTGGCATGGCGGTTAACATTTTTGCTTCAGATGCAGCAAAACTTCCCCATGTTGCTGCTCTTGGGGATGTCATTAAGCTCTGTAATGTCGTGGTAAAAGCATATGGTGCGGAAGTAAATGCTGTTTTCAACAAAAAGTTTTCTTCTTTTGCTTTATACAAAGGGAAAGATGGTGATGATTTTGTCCCTTATCAAGTTTCTTTGAAATTTTGTCCCAGAGATGAAGACAAAGTGTATTTAGAGAAGCTTAGAAAATGGCTGCCTAATTTTCAGCCTAGTGAAGATTCGAGTTATTTTCCCATGTTCAAAGAAATCAAGGGAGGAAATAACCTTAATTTGGCATGCAAGATCCTTCACTGCTGTGAGGTTGCAAAAGATGAATGGTTTATATTTGCTTGGGATGGTACTGATACCCCACCAAATGCCATATCTTCAAAGCTAGAAGATGAAGTTGATTCTCCGCTTCCTTTACAACTGGAACCTTCGGCTTTGCCTAAAGAGTTATTATGCACTTTTCCTGCTGTTGGATCGATCTTGAGGATAACTTCTAATCTAGGTGTTGAGAAGAACCATCTCCACCTTCTAAGCGTTGGTAAATGGGTCAAACTTGTCAATATGCAACTCGAGGTGCATGCTGGACTATGGCGTGGTGTTTTTACCCCATTTTCAAAGCTTCGATATACCTCTAATGAGGACTCTCTCATTGTAGAACGTCAGAGGTTGTCTGATGAGCGGCTGTCTGTGTTATCAGGAAAAGTGGTTCCTTGCAGCTTCCCTAAGCCTTCATGTATTACAGAAGTTAATCATGTTCATGATCGTGAAACACCTGTTACTTTAATGAGTGTCCTCACTCATTCACAGGTGACCTTGAAATTCAAGTGCATTGTTCGGGTGGTAGCAGCAATGCCATGCGAAGCTGAAGATTTATGCTCTCCTGCTGGGGTATATAGAATACGGCTAACCCTAGAGGATTCAACGGCTAGAATCCATGTTTTTGTAGTTGCTGAGGATGGGGTGACCCTTTTTGATGGTTATCCGGACATTGACCAGTTGAAAAGGAAGCTGAACAGTTTACTTGGAGTAGCAGAATGTGATGCTGGTCCTGGCGTGAAGAGTGCAGAGTGTGGAACTAGTACTGGGGTGAAGGATGCGCCAAGAAATCCGCCATGGGTTTGTGTTCATCTCATGTCATATAATGTGTCCGGAACTAGATGCTTCAAAATAGTTGATACCAAAATAGTGGGAGATACATGA 2736 0.4148 MASGNVFDERGIQKSYWVQHSADLSVEAMMLDSNAANLDKEERPEVLSLLPAYEGKSVVELGAGIGRFTGELAHKAAQLLAVDFIDSAIKKNESINGHHKNVKFLCADVTSPNLHVSEGSVDVIFSNWLLMYLSDNEVENLAERMIKWLKDDGYIFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECHMTDDTGNSYEFSLVGCKCIGAYVRNKKNQNQICWIWQKVRSHDDRGFQRFLDRVEYSHKSILRYEQMYGHGFVSTGGLETTKEFVAKLELKSGQKVLDVGCGVGGGDFYMAENFGVEVVGIDLSINMISLAIERAIGLKYAVEFDCADCYKKTYPENTFDVIYSRDTMLHVEDKPTLFRSFYKWLKPGGKILITDYCKSAGSPSSEFAEYIKKGGYYLHEMNAYRQMLEDAGFDDVIAEDRTDQFVKALEQELEALENKKDDFISDFSQEDYDEIAERWKAKQTRGASREQMWGLIIDETHHNAGMAVNIFASDAAKLPHVAALGDVIKLCNVVVKAYGAEVNAVFNKKFSSFALYKGKDGDDFVPYQVSLKFCPRDEDKVYLEKLRKWLPNFQPSEDSSYFPMFKEIKGGNNLNLACKILHCCEVAKDEWFIFAWDGTDTPPNAISSKLEDEVDSPLPLQLEPSALPKELLCTFPAVGSILRITSNLGVEKNHLHLLSVGKWVKLVNMQLEVHAGLWRGVFTPFSKLRYTSNEDSLIVERQRLSDERLSVLSGKVVPCSFPKPSCITEVNHVHDRETPVTLMSVLTHSQVTLKFKCIVRVVAAMPCEAEDLCSPAGVYRIRLTLEDSTARIHVFVVAEDGVTLFDGYPDIDQLKRKLNSLLGVAECDAGPGVKSAECGTSTGVKDAPRNPPWVCVHLMSYNVSGTRCFKIVDTKIVGDT 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02835 911 Gene3D Vaccinia Virus protein VP39 11 241 IPR029063 -
Cca09g02835 911 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 208 IPR029063 -
Cca09g02835 911 SUPERFAMILY Nucleic acid-binding proteins 597 703 IPR012340 -
Cca09g02835 911 Coils Coil 430 457 - -
Cca09g02835 911 Pfam Methyltransferase domain 275 427 - -
Cca09g02835 911 Gene3D Vaccinia Virus protein VP39 242 491 IPR029063 -
Cca09g02835 911 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 8 489 - -
Cca09g02835 911 PANTHER PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE 8 489 - -
Cca09g02835 911 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 254 486 IPR029063 -
Cca09g02835 911 CDD AdoMet_MTases 58 157 - -
Cca09g02835 911 Pfam Methyltransferase domain 60 157 IPR013216 GO:0008168
Cca09g02835 911 CDD AdoMet_MTases 286 387 - -
Cca09g02835 911 Pfam Telomeric single stranded DNA binding POT1/CDC13 487 581 IPR011564 GO:0000723|GO:0000781|GO:0003677
Cca09g02835 911 SUPERFAMILY Nucleic acid-binding proteins 483 583 IPR012340 -
Cca09g02835 911 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 492 IPR025771 GO:0000234|GO:0006656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02835 Cca-Chr9 53924540 53944010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02835 8 488 Acyl Lipid Metabolism Gene Families AT3G18000 73.389 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02835 K05929 - gmx:100820554 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02835 09 53924540 53944010 Cca09g02835 09 53924540 53944010 ECH