Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02806 ATGCTTTCCGTTAGGAATTTGTGGAGGCGGCATAGGAGGAAGATTTTCGTCACTGTTGGTGTTTTAGGAAGTGGGTATCTTTTGTATAAGCTCTATGGGGCTCACAGGCATGGGGTTCAGGAACTTGAAAGAGAACTCGCAGTGCAGAGGGAGTCTGAGGAGCTTATGAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAGAGGATATCTGATGTAACATTGCCTCTTGCTATGCACGACTTAAGCTGTCGGATCACAGAAGAGTTGGATCTTTCTCACCTTCTTGAAAGGCTAATACAAGGAAAGGGTCAACCAAACGCCTTAACACAATCAGAGAAACTAGATTTATGGAGTAGACTCAAAATTCTAAGTTTTACAAGAATGACATTGTCGGTATGGACTACAACAATGCTTAACTTATACACAAAAGTTCAAGTCAATATACTAGGAAGGCATCTATACATCGATACAGCACGAAGCCTCGGAATCTCTGATTCAGTGGAAAGTGGAGATGTGGTTGGTAAGGAAGACCAGAAGAAATTTTTAGATAGTGTTGATTTTCTCTCTCAGCATGGCATGCCTGCCTTGATTACTGATATGGAGGCAGCAACAAATGAGGTTCTCAAAGGAAAGCAGTTGAGTACTTCCTTCAACAGCACAACACTTCATGAAACTATCATGCGGATACTCAATACCTTCATGAGCAAGGGGACTCCAAATTCTTGGATAAAGTATATGATTCCTGAAGATGTTAAATCATTTTCCACATCCTCTGGCAGTGATGACCAAGTGCCATCTGATGTGACTGAATTTGAACAACTTATGATGGAAGCACAGGCAGTATTATCAAGTGCTGAATTTGGAAGCATTGTAGAGATGTCTCTGAAAGCAGTGGTGGATACACTGGTGGAGCTCATGGGGGCTAAATTTAGTGGGGGAAGTGTAACAGCGGGTGTGCCGCTGGCCAGAGTGTTGCCGCAAGTTGCACAGATGTGTCCTTTGCTCCTTGAAGAACCCAGCAAAAATCAGTTCATCCAAATCATTAAAAATATACAGGAGCTTCTACATCAGGATGAGATATGCAAGAGTTGTTCAATGATGTCCAATTATTTTGCAATACGCTTTTATTTGGGAACATATGATAACATTAGGGAAAATAAGCAAGCAACCATGGCGGATCGAAGCAACGGGGAAGTTCTAATGCTGGAAGCTCCACCGTCTTACGGTAAGCCAGCCAGTTCGGACGCCGAAATCATCGATGCACTGCCCTACATTGATGACGACTACGCAGACCCCAGAGTCAAACTCGAAGTTGACCGTCTCGTCGAGGAAGAGATGCGCCGCAGCTCTAAGAAGCCCACCGATTTCCTCAAAGACTTCCCTCCTCTTCCCAACTCCAGTTTCCAGAACTACCCAATGATTGCCAGAGAATACGAACGTGTAAGAGCCGGGAGGCCTCCCGTTGCTCTTGACAGGTCGCGCTACGAATTGGAAATGCCGCCGGCGAATAAAAGGAACGATGAAACTGCTTGGAAGCAAGCCCTGAATAGAGCTCAACGCCTACTGCAATATCAGATGATGAGAATGGAAAATTTGGATTTGATGCTAAAATATGGTCCTGATACGTGGAAACTACACAACCAACGATTGGAAGTATACTTATCAAGGTTTGTTGATCGAATAAATGTGGGTCATTTAGATTTTGTTTGGAATTCTACACTTGCTACCTCCGTGGCATCAATCTAA 1749 0.438 MLSVRNLWRRHRRKIFVTVGVLGSGYLLYKLYGAHRHGVQELERELAVQRESEELMKAQMQAHFENIQRISDVTLPLAMHDLSCRITEELDLSHLLERLIQGKGQPNALTQSEKLDLWSRLKILSFTRMTLSVWTTTMLNLYTKVQVNILGRHLYIDTARSLGISDSVESGDVVGKEDQKKFLDSVDFLSQHGMPALITDMEAATNEVLKGKQLSTSFNSTTLHETIMRILNTFMSKGTPNSWIKYMIPEDVKSFSTSSGSDDQVPSDVTEFEQLMMEAQAVLSSAEFGSIVEMSLKAVVDTLVELMGAKFSGGSVTAGVPLARVLPQVAQMCPLLLEEPSKNQFIQIIKNIQELLHQDEICKSCSMMSNYFAIRFYLGTYDNIRENKQATMADRSNGEVLMLEAPPSYGKPASSDAEIIDALPYIDDDYADPRVKLEVDRLVEEEMRRSSKKPTDFLKDFPPLPNSSFQNYPMIAREYERVRAGRPPVALDRSRYELEMPPANKRNDETAWKQALNRAQRLLQYQMMRMENLDLMLKYGPDTWKLHNQRLEVYLSRFVDRINVGHLDFVWNSTLATSVASI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02806 582 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 418 558 IPR008409 GO:0006397
Cca09g02806 582 Coils Coil 39 59 - -
Cca09g02806 582 PANTHER PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE 6 355 - -
Cca09g02806 582 Pfam Peroxin-3 106 355 IPR006966 GO:0005779|GO:0007031
Cca09g02806 582 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 6 355 IPR006966 GO:0005779|GO:0007031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02806 K13336 - gmx:100782816 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02806 09 53657502 53666209 Cca09g02806 09 53657502 53666209 ECH