Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02795 ATGTACGACAGAATACTGGCCAAAAGCTTTAGTCGTTATGAGCAGAAAAGGTTTGGATACGGAGCATTTGTGAGCTGCTTGCTCATAGTTTTCAGTCTTTGCACTCTGTTTAAACCTTACTTGGGTCCGGTGAATGTTTTGAGCCTGAAGCTCTCCATTGGTGCTGACACCAAAATGCTGATGTTCAATGACACCAGCAGGTCTTCACAATTAGCCAAAGTGAAAGACATTGTAGGTGAAATTCTAGTTGAAGGCACTGGCAGTTCTCCACCAAGGGATAAAGTTGAAGGAAAAGAGGAGATATCAGAGGAGCTACTATACAATTCAGAAGAAAGAACAGAATTTTGCCAAGCAAGGGGAGATATCAGAGTCCATGGAAAATCCTCAACTGTTTACGTTGTTTCATCAAACACAACCATGAAGGGAAAAAACATGTCAAGAACTATAAAGCCTTATGCGCGAAAGGACGATGTAGATGCAATGATTCGTGTAAGAGAATGGTCAGTGAAGGCAGTAAATGCTAGTCAGAAAGTCCCCCAATGCACCAAAAATCACAGCATTCCAGGGTTATTATTTTCTACTGGAGGGTATGTTGGTAACCACTTCCATGAATTCACCGACATTGTTATTCCACTGTTTTTGACTTCTAGACAATTCAATGGAGAAGTACAATTTATCATAACTGAGAAGCGTCCTTGGTGGATTTCAAAGTACAAACCACTTCTTAAGAGGCTGTCCAACTATGAGATTGTGGACATCGATGGAGATGATGAACTTCATTGCTTCCATAGGGTGATTGTGGGTCTTAAACGGCATCATGAAGAGCTAAGTATTGACCCTCAAAAGTACTCGTATTCTATGAAAGACTTCAGGGATCTTTTGAGAAGTTCCTATGCATTGAAGAGAGTTGAAGCAGTCAAAATCAGAGATGGTCAACTTGGGAAGCCAAGGCTCATGATTCTTTCAAGAAAAAGAACAAGATCCTTCACTAACACAGATGAAATAGCAAAAATGGCTGAGAGTTTGGGCTTTGATGTCATTGTTAAGGAAGCAGGGGGGAGCATGTGGGGGTTTGCCGATGTTGTGAATTCTTGTGATGTGTTATTGGGAGTTCATGGTGCTGGTCTCACTAACATACTTTTCCTTCCAGAAAATGCAGTTTTCATCCAAGTTGTGCCTTTAGGTGGGTTTGCATTGGACTGGCTTGCCACAAATGACTTTGGAAAGCCCTCAAAGGATATGAACATAAAGTACTTGGAATACAAAATAAGCTTGGAAGAAAGCACTCTGATACAACAATACTCACTAGATCACATGTTTATAAAGGATCCCCCATTGATTGGGAAGATAGGATGGGAAGAATTTAAGTCAGTGTATTTGGACAAACAAAATGTAAAGCTTGATGTTGATAGGTTTAGGCCTACATTGCAGAAAGCCATTGAGCTATTGCATCAATAA 1458 0.4053 MYDRILAKSFSRYEQKRFGYGAFVSCLLIVFSLCTLFKPYLGPVNVLSLKLSIGADTKMLMFNDTSRSSQLAKVKDIVGEILVEGTGSSPPRDKVEGKEEISEELLYNSEERTEFCQARGDIRVHGKSSTVYVVSSNTTMKGKNMSRTIKPYARKDDVDAMIRVREWSVKAVNASQKVPQCTKNHSIPGLLFSTGGYVGNHFHEFTDIVIPLFLTSRQFNGEVQFIITEKRPWWISKYKPLLKRLSNYEIVDIDGDDELHCFHRVIVGLKRHHEELSIDPQKYSYSMKDFRDLLRSSYALKRVEAVKIRDGQLGKPRLMILSRKRTRSFTNTDEIAKMAESLGFDVIVKEAGGSMWGFADVVNSCDVLLGVHGAGLTNILFLPENAVFIQVVPLGGFALDWLATNDFGKPSKDMNIKYLEYKISLEESTLIQQYSLDHMFIKDPPLIGKIGWEEFKSVYLDKQNVKLDVDRFRPTLQKAIELLHQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02795 485 PANTHER GLYCOSYLTRANSFERASE 1 89 IPR007657 GO:0016757
Cca09g02795 485 PANTHER GLYCOSYLTRANSFERASE 106 485 IPR007657 GO:0016757
Cca09g02795 485 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 1 89 - -
Cca09g02795 485 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 106 485 - -
Cca09g02795 485 Pfam Glycosyltransferase 61 284 388 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02795 Cca-Chr9 53575519 53578178 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02795 - - gmx:100805608 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02795 09 53575519 53578178 Cca09g02795 09 53575519 53578178 ECH