Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02788 ATGGCATCTACTCTTCTATCTACAACAGCCATCACACTCAGTTCACTTATTGGTATTTTTGCCAACAGTACGTGGAGTTCTGATGACACTTCTTTCGTACCCTATGGCCGTTCTTCAATCAAACATATTTCTGTCACCATTTGCTTTCTTGTTGCATTTTTATGCAATGTGCAGTCTATAAGATACTATTGCCATGTCAGTTTCTTAATCACTGCACCAACAACCAGAGACAAAAGGGAGTATATGGAATACATTGCTAAGACATTGAATCGTGGGAGTCATTCTTGGTCCATTGGACTTCGAGCATTTTACTTGTCTTTTCCATTCTTCCTGTGGATTTATGGGCCCGTACCCATGTTTGCATGTTGCTGCTTGACATCACTTATTTTGTTCTTCTTGGATACAACAGCTAAAATCACGCGTGATCTTCACAGTAACTCATTCAAGAAGGAGAGAGGAACTCATGTAGAGTCTGCTGTGGAGCCTGATGATTATTATCATCCTTTATCTGGTAACAATTTGTCACAAAACTCGGGGGCCGATCATGTATAA 552 0.4022 MASTLLSTTAITLSSLIGIFANSTWSSDDTSFVPYGRSSIKHISVTICFLVAFLCNVQSIRYYCHVSFLITAPTTRDKREYMEYIAKTLNRGSHSWSIGLRAFYLSFPFFLWIYGPVPMFACCCLTSLILFFLDTTAKITRDLHSNSFKKERGTHVESAVEPDDYYHPLSGNNLSQNSGADHV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02788 183 MobiDBLite consensus disorder prediction 163 183 - -
Cca09g02788 183 PANTHER OS01G0683700 PROTEIN 1 163 - -
Cca09g02788 183 MobiDBLite consensus disorder prediction 169 183 - -
Cca09g02788 183 Pfam Protein of unknown function, DUF599 1 137 IPR006747 -
Cca09g02788 183 PANTHER OS02G0292800 PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02788 Cca-Chr9 53526398 53528747 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02788 - - gmx:100788312 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02788 09 53526398 53528747 Cca09g02788 09 53526398 53528747 ECH