Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02729 ATGGAAGAGTCCTCCAAGGCGGTTAGTTTAACAGTTGAGTCACCACAAGCTGAAGCAAAGCCTCCTCACGAGGCTGTGTTCCTCGTTTTGGCATATCTTCCAGTGTACGAGATTGTGGTCATGTCTCAAGTTTGCATATCATTAAGGGATGCAGTGAACAACGACATATTACCATGGTTGAATGTTATTGTCGAAAGGCCTCTGAGTTGGCGACTCAATGATGAGATTCTGATGAAAATCACCTCCAAGGCCAATGGTAGGCTCAAAACTCTGGCTCTCATCAACTGCATGCACGTTACCGACGAGGGACTCCAAAGGGTCGTGAAACAAAACCCTCTCATAAGCAAGCTCCATATACCAGCATGCACAGGCATAACCCCTGAAGGGGTTATAAGAGCCATGAAAACACTATGCCAAAGAAGCAATTGCTTAAAAACCTTGAGTATAAACGGTATCTGCAACATAGAGAAGGAAGATCTAGACTTGCTTACCATGTACCTCAGAAAGAACATACCATTACAGGAACAGCAAAAGCAGCAGCCTGTCTACTATCACCAACGTGGTAGCTTTTCTTTATTGAAACATGAAGAAAGCCAGAGGCTTATTGATTTAGAGATTTGTCCCAGGTGCTTTGAGGTGAGGATGGTTTATGATTGCCCAAAAGGGCACTGCATGAGGAAGGAATGGCCCCTAGCTCAATGTAGGGGTTGCAACTTTTGCATTTCAAGGTGTGAAAACTGTGGTGGATGCATTGAATCCGGAGAGGTAGAAGAGGGAGCTTGTGAAGATATCTTGTGCCTTGAATGTTGGTTACAGCTTCCCAAGTGCAGTTTCTGTAACAAACCATACTGTAAGCAACACACAAATTGGTGGCGCACTTCTTCAGAGTCTTCATTGATCTGTAAAGTTTGTGATGAAAATTCTCATGGATATACGTATACTGATGTTCTATAA 954 0.435 MEESSKAVSLTVESPQAEAKPPHEAVFLVLAYLPVYEIVVMSQVCISLRDAVNNDILPWLNVIVERPLSWRLNDEILMKITSKANGRLKTLALINCMHVTDEGLQRVVKQNPLISKLHIPACTGITPEGVIRAMKTLCQRSNCLKTLSINGICNIEKEDLDLLTMYLRKNIPLQEQQKQQPVYYHQRGSFSLLKHEESQRLIDLEICPRCFEVRMVYDCPKGHCMRKEWPLAQCRGCNFCISRCENCGGCIESGEVEEGACEDILCLECWLQLPKCSFCNKPYCKQHTNWWRTSSESSLICKVCDENSHGYTYTDVL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02729 317 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 14 310 - -
Cca09g02729 317 SUPERFAMILY RNI-like 76 174 - -
Cca09g02729 317 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 234 245 IPR017900 -
Cca09g02729 317 Gene3D Ribonuclease Inhibitor 53 172 IPR032675 -
Cca09g02729 317 PANTHER F-BOX PROTEIN SKIP28 14 310 - -
Cca09g02729 317 SUPERFAMILY F-box domain 22 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02729 Cca-Chr9 52992172 52993880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02729 - - vra:106769044 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02729 09 52992172 52993880 Cca09g02729 09 52992172 52993880 ECH