Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02728 ATGGAAGGTGCGGAGGAGGAGCTAGAAAGAAGAAGCAGGTTTCTTAAAAGCTTGATACAGAAGAAGAAAACCATAGAGCAACAAGAGCAGCATGATCACCTGCAACACAATAACCTTCGTGTCAGAGCTTGTGACATGCCTCTCCCTCTTCAGAATCGTGCCTTTCGTTGTGCACGTGATCTCCTCGATTCTATGCCACCAAAGAAGCTTGATAGTAAACGCCTGGCCCTCACACTTAAGAAGGAATTTGATTCTTCGTATGGTCCAGCTTGGCACTGCATTGTGGGTACTAGTTTTGGCTCCTATGTTACTCATTCCCTTGGTGGTTTCGTGTATTTTTCCATTGACAAGGTCTATGTTCTTCTCTTCAAGACAGCTGTTGAACCATTAGACCATTCATAG 402 0.4453 MEGAEEELERRSRFLKSLIQKKKTIEQQEQHDHLQHNNLRVRACDMPLPLQNRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYVLLFKTAVEPLDHS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02728 133 Pfam Dynein light chain type 1 40 125 IPR001372 GO:0007017|GO:0030286
Cca09g02728 133 PANTHER DYNEIN LIGHT CHAIN 1 131 - -
Cca09g02728 133 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 21 126 IPR037177 GO:0007017|GO:0030286
Cca09g02728 133 SUPERFAMILY DLC 34 125 IPR037177 GO:0007017|GO:0030286
Cca09g02728 133 SMART Dynein_light_2 34 125 IPR001372 GO:0007017|GO:0030286
Cca09g02728 133 PANTHER DYNEIN LIGHT CHAIN 1 131 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02728 Cca-Chr9 52989140 52991107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02728 K10418 - gmx:100805980 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02728 09 52989140 52991107 Cca09g02728 09 52989140 52991107 ECH