Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02725 ATGTATCAACAAGCTCCTTCAGATCCACCCAAGTCACTCGCCACCGGTTTTCCGGTCACCTACAACAGCACTaccacaacctactcctcctccaccaccgacacttcctatgctccaccgccacctccCCAACCTAAACCTATTGTTCAATGGTCCACCGGTCTCTGTGACTGCTGTTCCGATCGTGCAAACTGTAAGACGTACTATTGTTCAAtcatgctcatgctcatgctcatgctcatgcccatgcCCATCTTTTCAGGTTGCATTACTTGCTGGTGCCCATGTGTTACCTTTGGCCGAGTTACGGAAATTGTTGACAAGGGATCCACATCATGTGGTGCTAGTGGGGCTCTGTATACGCTCATTTGCTGTGTCATTGGCTGTGCTTGCCTATACTCTTGCTTCTACCGCTCCAAGATGAGACGACAGTATGGTTTGAAAGGAAATGCTTGTACAGATTGCTTGCTTCATTGCTGCTGCGAGTACTGTGTTCTCTGTCAAGAATATCGTGAGCTTCAGAACCGTGGATTTGACATGATTATTGGTATCATATCAACCTTCTTTTCTTCAACCTACACATCACAACATCCTTTCTCTTTTTATTACCCTCTCTTCCTTTCTTCCTTAATTAATACTACCTACTAA 648 0.3781 MYQQAPSDPPKSLATGFPVTYNSTTTTYSSSTTDTSYAPPPPPQPKPIVQWSTGLCDCCSDRANCKTYYCSIMLMLMLMLMPMPIFSGCITCWCPCVTFGRVTEIVDKGSTSCGASGALYTLICCVIGCACLYSCFYRSKMRRQYGLKGNACTDCLLHCCCEYCVLCQEYRELQNRGFDMIIGIISTFFSSTYTSQHPFSFYYPLFLSSLINTTY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02725 215 Pfam PLAC8 family 51 172 IPR006461 -
Cca09g02725 215 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 87 187 - -
Cca09g02725 215 PANTHER DUF614 FAMILY PROTEIN-RELATED 30 71 IPR006461 -
Cca09g02725 215 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 30 71 - -
Cca09g02725 215 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 88 175 IPR006461 -
Cca09g02725 215 PANTHER DUF614 FAMILY PROTEIN-RELATED 87 187 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02725 Cca-Chr9 52962863 52964061 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02725 - - gmx:100306298 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02725 09 52962863 52964061 Cca09g02725 09 52962863 52964061 ECH