Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02714 ATGGCGGGTTCTTCGATCATGGAGAACCTCTTCCAGCGCACGCTGGAGGATCTGATCAAAGGCATGCGCCTCCAGCTCATTGGCGAGTCTACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGCGAGATCAAATCCACCGACCACCACACCAAATCCACGGCGCTCCTCAAGCTCTGCTACCTCTCCGCCGTGCACGGCGTCGACATGTCCTGGGCGTGCTTCCACGTGGTGGAGGTCATGTCCTCCTCGCGGTTCGCGCAGAAGAGGATCGGCTACCACGCGGCGTCGCAGTCCTTCCACGACGACACTCCGGTGCTCCTCCTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCGCCAACCACTTCGAGGTAAGCCTCGCCCTCGAATGCCTCTCCCGAATCGCCACGCCCGATCTCGCTAGGGATTTGACCCCCGAGCTTTTCAATTTGCTCTCCACCGCTAGGGTTTTCGTTCGGAAGAAGGCTATTGCCGTCGTTTTGAGGCTCTTCGATAAGTACCCCGACGCCGTCAGGGTTTGCTTCAAGCGCTTGGTCGAGAATCTCGAGAGCTCCGATCCTCAGGTTGTCACTGCCGTCATCGGGGTTTTCTGCGAGCTCGCTGCCAAGGATCCGAGGTCGTATCTTCCCCTGGCGCCCGAGTTTTATAGAATTTTGGTTGATTCTAAGAACAATTGGATTTTGATTAAGGTGCTGAAGGTGTTTGCTAAGTTGGCTCCCTTGGAGCCTAGGTTGGGGAAGAGGATTGTTGAGCCTGTTTGTGAGCATATGAGGAGGTCTGGGGCGAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGTGGTTATGAGTCTGCTGTTAAGCTCGCGGTCGAGAAGGTTAGGGAGTTGGTGGATGATCAGGATCCCAATCTTAGGTATCTTGCGCTGCACGTGCTTTCGGTTGCTGTGCCGGAGCACTTGTGGGCAGTGTTGGAAAACAAGGAAGCGGTGATTAAGTCGTTGAGTGATGAGGATTCCAATATCAAGATTGAGTCTCTGCGGCTGTTGATGGCCATGGTGTCCGAGAGCCATTTGGCGGATATATCCAGGGTGTTGCTCAATTATGCATTGAAGTCTGACCCTGAATTTTGCAATGAGATTTTGGGCTCCATTTTGACGACGTGTGGTAGGAATGTGTATGAGATTGTTGATGACTTTGATTGGTATGTGTCTCTTCTTGGAGAAATGGCGACGATTCCTAACTGCCAAAAGGGGGAAGAGATTGAGACTCAGCTTGTTGATATCGGCATGAGAGTTAGGGATGCTAGAATGCAGCTTGTTCAGGTTGGGCGGGATCTGTTGATTGACCCTGCGTTACTGGGTAATGTGCATTTGCATAGGATTTTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTATGTTGAGGTTGCGAGCAATCCTTTTGAACTCATGGATGCACTCCTACAGCCTCGTACCAGTCTCTTGCCACCATCAATAAGAGCAGTTTATATTAATGCTGCTTTTAAAATTTTAATTTTTTGTCTAGACTGTTACCTTCTGCAAAATGAAGGTACTGCATCCTTGGATTCTGGTAACTTGGCTGGGGGACAGTCAGAGTTGTTTAGTGTAAAAAATGACACTGAAGCTGCTGAATTGGCAACATGTGAAGGTTCAAAGTATGAACAGGATGCAGGTTTTAACCCGAGGAATACAACTGAATCTTTTGATGATCTTTCTGCTGAAAATGGCATTGAGAGAGTTGCCACTCATGATCAAACAATAACACCTACATTCGTGGAAAAGAAGAATTTCATGCATGAATCCATTGTAAACCTGTTGAATAGAATTGAGTTAATTTTTGGCCCACTAATAGCAAACCAGGATGTTGACGTGCTGGAGAGAGCACAAAACATGCTTTCCCTTGTTCTGTTGATTAAAGGAGAAAATGATAATTCATTTCAGGATGTGGACAAGAAAGATACTCGAGTTTCAGCTATTATCAAATTGATGCGTGATGCTTTTACTATGGAACTTGGTCCAGTGTCAACAAGTGCACAAGGAAGGGTTGCTGTGCCGGATGGATTAGTTCTTAAAGAGAATCTTGGTGACTTACATGCAATATGTGGTGATATTGAACTGCCGTCATCAAGTTCGTTTTCCACAGCAGGCCCTCACCTTACCGCTACTTCAGATGCTTCTTCATCTAATCCTCTGATAAATGAAGAGTCAGGGGCATTGAATGAATCTACATCCTTGATTGAACACCGTAAGCGGCATGGATTATATTATCTTCCTTCAGAGAAGAGTGAGATTGTTACAGATGAGTATCCTCCTGCAAATGATCCAAAGTCAAACAGTAATATAAATGATGAAGCTTCAGAGCTAGTCAAGCTAACAGAGCAATCGCTTCTTCTGAAGAAAAGGACAAACCAAACAAAGCCTAGGCCTGTGGTGGTGAAATTGGATGATGGAGATGTGGCACCAATATCAGTCCAAAGGCCAGAGCCAAGGGGTGATTCTCTTTCTGGTGCCATAAAAGATGTTCTTCTCGGAAGCGAAACTGGGCCAAGTATGTCTCAAAGTAATCCTTATGATAAGTCATCAAGGAAGCAGAAAGAGAAAAAGAAACTAGGCACAAATGTTCAGTCTGAAATGAAGGAAAATGTAGTTGATGCAGAAAAGCCCGACTCTGAAAATCCAAATTCAAGTGGCAAAAATCATGGTCATACTAGAGAGAGAAGACACAGAGGAAAAGAGAAGATTGTTGAGGGGGAAGAGCATGATCAAAGGGGAAAGAAAAAGAGTGGCCACCGCCACAGTAGGCGAAAAACTCATCAAAGAGCAAAGTCACCCTTAAATGTGGTTTCCCAAACACCAGAAATTCCAGATTTTCTTTTGTAG 2916 0.4671 MAGSSIMENLFQRTLEDLIKGMRLQLIGESTFISKATEEIRREIKSTDHHTKSTALLKLCYLSAVHGVDMSWACFHVVEVMSSSRFAQKRIGYHAASQSFHDDTPVLLLITNQLRKDLSSANHFEVSLALECLSRIATPDLARDLTPELFNLLSTARVFVRKKAIAVVLRLFDKYPDAVRVCFKRLVENLESSDPQVVTAVIGVFCELAAKDPRSYLPLAPEFYRILVDSKNNWILIKVLKVFAKLAPLEPRLGKRIVEPVCEHMRRSGAKSLVFECVRTVLTSLSGYESAVKLAVEKVRELVDDQDPNLRYLALHVLSVAVPEHLWAVLENKEAVIKSLSDEDSNIKIESLRLLMAMVSESHLADISRVLLNYALKSDPEFCNEILGSILTTCGRNVYEIVDDFDWYVSLLGEMATIPNCQKGEEIETQLVDIGMRVRDARMQLVQVGRDLLIDPALLGNVHLHRILCAAAWVAGEYVEVASNPFELMDALLQPRTSLLPPSIRAVYINAAFKILIFCLDCYLLQNEGTASLDSGNLAGGQSELFSVKNDTEAAELATCEGSKYEQDAGFNPRNTTESFDDLSAENGIERVATHDQTITPTFVEKKNFMHESIVNLLNRIELIFGPLIANQDVDVLERAQNMLSLVLLIKGENDNSFQDVDKKDTRVSAIIKLMRDAFTMELGPVSTSAQGRVAVPDGLVLKENLGDLHAICGDIELPSSSSFSTAGPHLTATSDASSSNPLINEESGALNESTSLIEHRKRHGLYYLPSEKSEIVTDEYPPANDPKSNSNINDEASELVKLTEQSLLLKKRTNQTKPRPVVVKLDDGDVAPISVQRPEPRGDSLSGAIKDVLLGSETGPSMSQSNPYDKSSRKQKEKKKLGTNVQSEMKENVVDAEKPDSENPNSSGKNHGHTRERRHRGKEKIVEGEEHDQRGKKKSGHRHSRRKTHQRAKSPLNVVSQTPEIPDFLL 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02714 971 Pfam Adaptin N terminal region 31 509 IPR002553 GO:0006886|GO:0016192|GO:0030117
Cca09g02714 971 MobiDBLite consensus disorder prediction 921 937 - -
Cca09g02714 971 SUPERFAMILY ARM repeat 30 659 IPR016024 -
Cca09g02714 971 PANTHER DELTA ADAPTIN-RELATED 3 970 IPR017105 GO:0015031|GO:0030123
Cca09g02714 971 MobiDBLite consensus disorder prediction 871 905 - -
Cca09g02714 971 MobiDBLite consensus disorder prediction 724 752 - -
Cca09g02714 971 Gene3D - 4 539 IPR011989 -
Cca09g02714 971 MobiDBLite consensus disorder prediction 938 953 - -
Cca09g02714 971 MobiDBLite consensus disorder prediction 856 971 - -
Cca09g02714 971 PIRSF AP3_delta 1 966 IPR017105 GO:0015031|GO:0030123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02714 K12396 - gmx:100815221 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02714 09 52824015 52827308 Cca09g02714 09 52824015 52827308 ECH