Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02704 ATGGCCGGAAAACAGGTCGGCGGCGAGGGATTACCGGCGAACCTCGCCGGAATGTCGAAGAACCAGCTCTACGATATCATGTCTCAGATGAAGAATCTAATCGAACAGAACCAGCAACAGGCGAGGCAGATCCTCATCCAAAACCCTATGTTAACCAAAGCGCTTTTTCAGGCACAAATTATGCTTGGAATGGTTCAACCACCTCAAGTGGTTCCAAAAGTTCAGCCAATAGTTTCGCAGAACAATCAGCAGTCAGTACAACCAACACAACAACCAAATATTCAGCCTGCTCCGTTATTGCCTGGGCTCGGTGGTGCACAGGATCAAGCAGGTGTGTCTCAGACCCAAATTCCTTCGAGGAAACACCAGAATCAACCTTCGGTGCAAGTTTCATCTGCTGTTCCTGCTATGAGTCATCAATCTCAGCCTATGGCTGCACATTCTTTGCCAATGCCACAACAGCCTAAAGGACATTTGACTCCACAAGTGGCTCCAGTGTCTCTTCCGCAATCATCACAACTCCCAAACATACCTCCACCTTCTCTTCATTCACCGTCACAGCCTCTTCATCCAACTCAAATTCCAACTGCTTCAAGCCAGTCACAGCAACCATTGCAGACACCTGGATTTCTACATATGCCTCTGCAACCACCACTGCCTCAGCACAGACCACCTGCAGTGCCAACCTTCCATCCCCAATATCCCCCACAAATGGGTGCAAACTTAGGTTTTCAACATGCTGGTGCTTCTCACAATCTTCCACAATCCATGTTTCATCCAGGTTCAAAACCTCCTGCTAGTGTTGGATCCACGTTTCCACAGGGGCAGACACCACTTCCAAGTCAACAATCATCTCAGCCACCTTATCAGGTTGGGAATATGCCTTTAGGACCTGACTTCGGGAATCAAGGTGGAAATGCTATGCAAATAGACAGAGGGTCTTCTTGGATTGGTCCCTCAGAAAACCTAGCACATCTTTCCGGTCCTCCTGGTCAGATGGGTGCTGCTCTTCGGCCTCCTGCGTTGACACCAGAGATGGAGAAGGCGCTGCTTCAGCAAGTGATGAGCCTCACACCGGAGCAGATAAATCTGCTTCCTCCAGAACAAAGAAATCAAGTGCTGCAGCTACAGCAGATGTTGCGTCAATGA 1149 0.4909 MAGKQVGGEGLPANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKALFQAQIMLGMVQPPQVVPKVQPIVSQNNQQSVQPTQQPNIQPAPLLPGLGGAQDQAGVSQTQIPSRKHQNQPSVQVSSAVPAMSHQSQPMAAHSLPMPQQPKGHLTPQVAPVSLPQSSQLPNIPPPSLHSPSQPLHPTQIPTASSQSQQPLQTPGFLHMPLQPPLPQHRPPAVPTFHPQYPPQMGANLGFQHAGASHNLPQSMFHPGSKPPASVGSTFPQGQTPLPSQQSSQPPYQVGNMPLGPDFGNQGGNAMQIDRGSSWIGPSENLAHLSGPPGQMGAALRPPALTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02704 382 MobiDBLite consensus disorder prediction 242 287 - -
Cca09g02704 382 Gene3D - 343 382 IPR038192 -
Cca09g02704 382 MobiDBLite consensus disorder prediction 81 211 - -
Cca09g02704 382 MobiDBLite consensus disorder prediction 187 209 - -
Cca09g02704 382 MobiDBLite consensus disorder prediction 172 186 - -
Cca09g02704 382 MobiDBLite consensus disorder prediction 267 287 - -
Cca09g02704 382 Pfam Hinge domain of cleavage stimulation factor subunit 2 14 69 IPR025742 -
Cca09g02704 382 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 382 - -
Cca09g02704 382 MobiDBLite consensus disorder prediction 108 148 - -
Cca09g02704 382 Pfam Transcription termination and cleavage factor C-terminal 348 382 IPR026896 GO:0031124
Cca09g02704 382 Gene3D - 9 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02704 - - gmx:100801770 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02704 09 52717600 52722245 Cca09g02704 09 52717600 52722245 ECH