Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02694 ATGTCACGAATCTTCGAGTACTTCGTGGTGTGCGGGATCGGACCAGAGATTCGAACCATCGACGGAAGCAAAGGGTACCATGGCCCTGGTTGCATGTATCTTCCTTCTCTTCTCGATCAGCATCCTCCTCCCAATCACACTCTCTACCCTCCTCCGCCACCTCAGCTTTCCACATGTGTTCTACCAGCCGGCGTTGAATTCTATTCGTCGGGATTCGATTCCAATGATCATTCCACGTTTCCGCGGAGCTATCCGATTGTTTTGACCGAGGGTGATGGATCAAAAATCTATGTAAGTTGCATTTCTTTCCGGGATCCAGTTTGTGAGGATATTGCAGAGGCCTACCGGATACAGGCAAATTCATATGCTGACAAATGCATCTGCCTGGTTTCACGCTTGCCTAGTTTCAGTGTACTAAGAAGTGCTCTAGAGGAAATATTTGCTCTGTGTTTTTCCCCAAATGGAAGTAGGAAGCCGCTATGGGATGTTATAGCACATATGGTGTCCAGTGTGCCTTTGCCAACTCCTGGAAAGGAACGAGTTCTGTTTGCTATTGAGAGTTGTCTACTTTCTGTAGAGGTTCCACCTAATGATGGGCTTCCCCATGCTGATATATCATTTCAGCCTCTAGTGCAGTGTTTGGATGTTGACAACTTAGTGAGACTTTTTACAGCAGTGTTGCTTGAGAGAAGGATTTTGCTTCGTGCTAACAAGTATTCTCTTCTAACTCTTGTATCAGAGGCCATTTGTCACTTAATCTACCCATTCCGATGGCAGCATGTATACATTCCGTTGCTGTTTTTCAGTGGAGTAGATTATATTGATGCTCCTACACCTTATATGATGGGGCTCCATTCAGGAGTTGATACTTCTACTCTGACAATGGATGGGGTTGTTGTTGTGGACCTTGAGTATAATCTTATCACTACCTCAGAGGAAATTCCTCCTATTCCTGAACCAGAATTCAGCTTTTTGCGTGGTGAGATAATGAAGCTATTATATCCCAATGTAATTGGAATTGATGAAATGAAGTCTGGAATATACAGTGTATCTGAGAATTATCCTAAACTTAGTGCTAAACCATGGGGAGAGGAACACGACCTTCAGCTAAGGATGATATTCCTAAAGTTCTTTGCAACAGTTTTAAGTGGCTATCGCAATTTCCTAGAAAATAGCGCTACTCAAGTATTCAACTCCCAAGCTTTTTTGAAGAAGCGATCTCGTTCTACTAATCAACCGACAGAGCCCATGATAGCCCAGTTCCTTGACACTCATGGTTTCTTGGATTATTTGGAGAGAGTAGGTTCTGATGAAAACTATAATCTGCTTGATAAGCTACAAGATGCAATTGGAAGGGGTCAAAACCCTATGTCAGTTCTTCCTTCATCCTCAGTAGAGCCTGAGATTTTAACAGTATCAGATTCTGATGTTGGAATATCAGGATCTGGTGCCAAATACACATACGATAGATTCCCTTCAAACATCAGAACagaagaacaagaagaaaagaggaaACAGATTCTTGCAACAGTTAGTAATGCTTTTGAGTACTCAGGAAGACATACTCCAAGTAAGGATCCTTTAGCAGATACTCTTAGTCCACTTGAGAGAGCTGCTGAAAGGGAGCGCATGGTGCTAGATATTAAGGTTAAGCTGCAGGGTTTATGGCTGCGGCTTCTTAAATTAGGAGCAACTGATGATCCTCTCTCATCCTTTGAATATGGAACAATACTTGCTTTGATTGAATCTGATGCAGAGGGGATTGGTGGCAGTGGATTTGTTGAATGTATAAGGGAGCATATACATTCGGGTTGGGACTGTCAGCTCACTGAAGAACAGTTTATTGCAGTGAAAGAATTGCTTAAAACAGCTATCAATCGGGCAACATCACGGAATGACTTATTGACCATTAGAGATGCTCTTGAAGTTTCTTCTGATATGTATAAGAAAGATAATAATAATGTGCCAGACTATGTCCAACGTCATCTTATCTCTTTATCTATATGGGAGGAATTACGATTTTGGGAAGGATATTTTGACTATTTAATGGAGCAATCGTCAAACAAGTCTGCCAACTATGCATCTTTGGTGACAGCTCAGCTTGTTGTGCTGACATCACACATGGCTGGGCTGGGACTTCCTGATAGTGATGCTTGGTTCATGATCGAAACAATAGCAGAGAGGAACAGCATTGGATCCAAGCAATTTATAAAAATCAGAGGGTTCTTGTCTCATATCCAGCAATTACGTAATGGATACTGGGGAATCACCTCAATGAAGGCACAGTCTGTGTTATCACTTGCATTGTCATCCCCACATTCTAAAGATGTCAAAGATGAGAACCAGCAACCCACTGAGGCAACTGGTGTTGGTAGAAGTTGGGTGCAGAGTATGTTCAGCCGAAACACAACAACTAGATCTAGCTCATTTAGTCGTGTTCGTAGATGGACATCTGATGGAGGCAATTCAGCTACAAATGAAAATGGGACTCCTCGCAAACAAGATCTATCAAGTGGTGGCCAGAAAAAGCTTCAAACTAATGTTCGCTTACTTAGGGGTCACAATGGTGCCATTACTGCTCTCCATTGTGTTACGAAAAGAGAAGTGTGGGATTTGGTGGGTGACCGTGAAGATGCTGGTTTCTTTATTAGTGGAAGCACAGACTGCTCCGTCAAGATCTGGGATCCTAGTCTTCGCGGTTCTGAACTCAGGGCAACTTTAAAAGGACATTTTAGAACTGTTCGCGCCATAAGTTCAGACAGGGGGAAAGTGGTATCAGGATCTGATGATCAGTCTGTTTTGGTGTGGGATAAGCAAACAACTCAACTTCTAGAAGAGCTTAAAGGCCATGATGGACCGGTCAGCTGTGTGCGCATGCTCTCAGGTGAACGGGTGTTAACTGCATCCCATGATGGTACTGTGAAGATGTGGGATGTAAGAACTGATAGATGTGTTGCAACTGTTGGTCGTTGCTCTAGTGCTGTTTTATGCATGGAATATGATGACAATGTGGGAGTCTTGGCTGCTGCCGGAAGAGACGTGGTTGCTAACATATGGGACATCCGTGCTAGTAAGCAGATGCATAAACTTTCAGGACATACACAGTGGATACGGTCCATAAGAATGGTTGGTGACACTGTGATTACTGGTAGTGATGATTGGACAGCAAGAATATGGTCTGTTTCCCGAGGAACATGTGATGCTGTCCTAGCTTGCCATGCAGGGCCAATATTATGTGTTGAATATTCTTCTTTAGATCGAGGAATAATTACAGGGTCAACTGATGGTCTTCTACGTTTTTGGGAAAATGATGATGGAGGTATACGATGTGCAAAAAATGTTACAATTCACAATGCCGCCATATTATCTATCAATGCTGGGGAGCACTGGTTAGGCATTGGAGCAGCTGATAATTCTTTGTCACTGTTTCACCGGCCCCAAGAAAGACTTGGTGGTTTTTCTGGCCCTGGGTCCAAGATGGCTGGTTGGCAGCTTTACAGAACACCACAGAAAACAGTTGCTATGGTAAGATGTGTTGCTTCAGACTTGGAAAGGAAAAGGATATGCAGCGGTGGTCGCAATGGGCTTCTAAGGCTGTGGGATGCAACCATTAATATTTGA 3621 0.43 MSRIFEYFVVCGIGPEIRTIDGSKGYHGPGCMYLPSLLDQHPPPNHTLYPPPPPQLSTCVLPAGVEFYSSGFDSNDHSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQANSYADKCICLVSRLPSFSVLRSALEEIFALCFSPNGSRKPLWDVIAHMVSSVPLPTPGKERVLFAIESCLLSVEVPPNDGLPHADISFQPLVQCLDVDNLVRLFTAVLLERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHSGVDTSTLTMDGVVVVDLEYNLITTSEEIPPIPEPEFSFLRGEIMKLLYPNVIGIDEMKSGIYSVSENYPKLSAKPWGEEHDLQLRMIFLKFFATVLSGYRNFLENSATQVFNSQAFLKKRSRSTNQPTEPMIAQFLDTHGFLDYLERVGSDENYNLLDKLQDAIGRGQNPMSVLPSSSVEPEILTVSDSDVGISGSGAKYTYDRFPSNIRTEEQEEKRKQILATVSNAFEYSGRHTPSKDPLADTLSPLERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDAEGIGGSGFVECIREHIHSGWDCQLTEEQFIAVKELLKTAINRATSRNDLLTIRDALEVSSDMYKKDNNNVPDYVQRHLISLSIWEELRFWEGYFDYLMEQSSNKSANYASLVTAQLVVLTSHMAGLGLPDSDAWFMIETIAERNSIGSKQFIKIRGFLSHIQQLRNGYWGITSMKAQSVLSLALSSPHSKDVKDENQQPTEATGVGRSWVQSMFSRNTTTRSSSFSRVRRWTSDGGNSATNENGTPRKQDLSSGGQKKLQTNVRLLRGHNGAITALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSELRATLKGHFRTVRAISSDRGKVVSGSDDQSVLVWDKQTTQLLEELKGHDGPVSCVRMLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGVLAAAGRDVVANIWDIRASKQMHKLSGHTQWIRSIRMVGDTVITGSDDWTARIWSVSRGTCDAVLACHAGPILCVEYSSLDRGIITGSTDGLLRFWENDDGGIRCAKNVTIHNAAILSINAGEHWLGIGAADNSLSLFHRPQERLGGFSGPGSKMAGWQLYRTPQKTVAMVRCVASDLERKRICSGGRNGLLRLWDATINI 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats profile. 907 946 IPR001680 GO:0005515
Cca09g02694 1206 SMART uDENN_cls 1 104 IPR005113 -
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats profile. 1070 1102 IPR001680 GO:0005515
Cca09g02694 1206 SUPERFAMILY WD40 repeat-like 848 1202 IPR036322 GO:0005515
Cca09g02694 1206 Pfam WD domain, G-beta repeat 942 978 IPR001680 GO:0005515
Cca09g02694 1206 Pfam WD domain, G-beta repeat 1065 1101 IPR001680 GO:0005515
Cca09g02694 1206 Pfam WD domain, G-beta repeat 1025 1060 IPR001680 GO:0005515
Cca09g02694 1206 Pfam WD domain, G-beta repeat 905 937 IPR001680 GO:0005515
Cca09g02694 1206 Pfam WD domain, G-beta repeat 847 895 IPR001680 GO:0005515
Cca09g02694 1206 CDD WD40 847 1143 - -
Cca09g02694 1206 MobiDBLite consensus disorder prediction 803 842 - -
Cca09g02694 1206 SMART dDENN_cls 366 434 IPR005112 -
Cca09g02694 1206 Gene3D - 799 1025 IPR015943 GO:0005515
Cca09g02694 1206 ProSitePatterns Trp-Asp (WD) repeats signature. 1188 1202 IPR019775 -
Cca09g02694 1206 SMART DENN_cls 122 306 IPR001194 -
Cca09g02694 1206 ProSiteProfiles Tripartite DENN domain profile. 18 441 IPR037516 -
Cca09g02694 1206 Gene3D - 202 387 IPR043153 -
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats profile. 877 895 IPR001680 GO:0005515
Cca09g02694 1206 PANTHER C-MYC PROMOTER BINDING PROTEIN 3 1206 - -
Cca09g02694 1206 PRINTS G protein beta WD-40 repeat signature 924 938 IPR020472 -
Cca09g02694 1206 PRINTS G protein beta WD-40 repeat signature 965 979 IPR020472 -
Cca09g02694 1206 PRINTS G protein beta WD-40 repeat signature 1047 1061 IPR020472 -
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats profile. 1030 1069 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 1063 1102 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 1023 1060 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 1162 1201 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 900 937 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 981 1020 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 844 895 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 1107 1144 IPR001680 GO:0005515
Cca09g02694 1206 SMART WD40_4 940 978 IPR001680 GO:0005515
Cca09g02694 1206 PANTHER DENN DOMAIN-CONTAINING PROTEIN 3 3 1206 - -
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1070 1102 - -
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats profile. 947 987 IPR001680 GO:0005515
Cca09g02694 1206 ProSitePatterns Trp-Asp (WD) repeats signature. 965 979 IPR019775 -
Cca09g02694 1206 Gene3D - 1 176 - -
Cca09g02694 1206 Pfam uDENN domain 35 103 IPR005113 -
Cca09g02694 1206 Gene3D - 1026 1206 IPR015943 GO:0005515
Cca09g02694 1206 Pfam DENN (AEX-3) domain 123 304 IPR001194 -
Cca09g02694 1206 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 947 981 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02694 842 1153 Acyl Lipid Metabolism Gene Families AT3G18860 25.796 5.17e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02694 - - gmx:100818305 2270.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02694 09 52567633 52585664 Cca09g02694 09 52567633 52585664 ECH