Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02691 ATGGCCTGCAACAGTTGCTCTTCTTCGTCCTGGCTCATACTCTCATCCACCCACGCCAAACGCCTTCCCATTGCTTCGCAAATTCAATGGCATTCAGATTCCTATACCCGCAAAAACCTCCACCACCCTCCCCAAATCAATCGCCATTGGGTTCAAGCTTCTGATCAAACGCTCGCGTCTCCAGAAAGATTCAGCGTGGCGTCATACAACATACTGGGGGATAGAAATGCTTCTCAACACTCTGATTTGTATGTGAACGTTCCTTCTCGTTACATCAACTGGGACCGTCGCAAGAGGGTTATTTGCGATGAACTCTTTGGATGGGACCCTGATATTATCTGCTTACAAGAGGTAGACAAGTATTTTGAACTCTCAAACATTATGGTTAAAGCAGGATATGCAGGATCTTATAAGAGACGCACTGGAGATACAGTTGACGGTTGTGCAATGTTTTGGAAAACTGATAAGTTCCGGTTACTAGAAGGAGAGAGCATTCAATTTAAGGACATTGGCCTTCGTGATAATGTTGCTCAACTTTCAGTTTTTGAGATGTGTGAATCTGACTCAAGAAGATTGTTAGTTGGTAACATCCACGTACTTTACAACCCAAGCAGGGGAGAAGTTAAAATAGGTCAAATTCGTTTTCTCTCGTCAAGAGCACAGTACCTCTCAGAGAAATGGGGTAATACCCCTGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCGTCTAAGCTTAATATCATGCTGTATGACAGAAAGGAATTATCTGGACAGAAACGCTGTCGTCCTGCCCAAGTTTTAGGCGAGAATAAAGAAACAGTTGGTCCAATCGTCACACTAGATGGATTGTTTAAGTGCTGGACAGATGAAGAGGTAAAAATAGCAACCGGAGATTCTGAGCGTTATTTGGCTGTGCATCCATTGAAGCTGAATAGTTCGTATGCCACAATTAATGGTTCAACTAGTACACGGGGATTCAATGGTGAACCCTTGGCAACTTCCTATCACTCAAAGTTTCTTGGCACTGTAGATTACTTATGGTACTCGGACGGTATTGTACCTACAAGAGTTCTTGATACCGTTCCAATAAGTGATCTCGTAAGGGCAGGTGGCCTCCCATGCAAGAAAGTGGGGAGCGACCATTTGGCCTTGGTTTCTGAATTTTCTTTCTCAATTAGCAACAATGAACCTACAGACACAGTGGCAGCAGCAGCAGCATCTCCTATAGTAGATATCGAAGAGCCTAACAATCAACAGTCATAG 1293 0.4346 MACNSCSSSSWLILSSTHAKRLPIASQIQWHSDSYTRKNLHHPPQINRHWVQASDQTLASPERFSVASYNILGDRNASQHSDLYVNVPSRYINWDRRKRVICDELFGWDPDIICLQEVDKYFELSNIMVKAGYAGSYKRRTGDTVDGCAMFWKTDKFRLLEGESIQFKDIGLRDNVAQLSVFEMCESDSRRLLVGNIHVLYNPSRGEVKIGQIRFLSSRAQYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSKLNIMLYDRKELSGQKRCRPAQVLGENKETVGPIVTLDGLFKCWTDEEVKIATGDSERYLAVHPLKLNSSYATINGSTSTRGFNGEPLATSYHSKFLGTVDYLWYSDGIVPTRVLDTVPISDLVRAGGLPCKKVGSDHLALVSEFSFSISNNEPTDTVAAAAASPIVDIEEPNNQQS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02691 430 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 20 401 - -
Cca09g02691 430 SUPERFAMILY DNase I-like 43 403 IPR036691 -
Cca09g02691 430 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 20 401 - -
Cca09g02691 430 Pfam Endonuclease/Exonuclease/phosphatase family 67 391 IPR005135 GO:0003824
Cca09g02691 430 Gene3D Endonuclease/exonuclease/phosphatase 36 416 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02691 Cca-Chr9 52541496 52546198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02691 65 252 EF-hand Containing Proteins AT5G54130 29.902 1.61e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02691 - - gmx:100779393 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02691 09 52541496 52546198 Cca09g02691 09 52541496 52546198 ECH