Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02472 ATGAATGGTATTCCGAAACACGAACGCCGATGGGCGTCCGACACCGTTCCTGGGAAAGCAACCGTCAGCGCCGGAACTTCGCCGGGAACCGAATCCAACTCCGCCGCCGAGGAGTTCGTGGAGGTAACTCTCGATCTCCAAGACGACGACACCATCGTTCTCCGGAGCGTCGAGCCGGCCTCCGTCATTAACATCGACGACAGCGTCTCCGGCAGCGGATACGAAACTCCGGCGTCAGTCACGCGGTCGCCGACGATCCGGCGAAGCTCGTCGAGAGGATTTCGGCAGTTCTCGCAGGAGCTGAAAGCGGAGGCGGTTGCGAAGGCGAGGCAGTTCTCGCAGGAGCTGCGAAGGTTCTCATGGAGCCACGGCAATGCTTCGCGCGCGCTTTCGTCTTCCTCCGCTCCTAACGCCGGCGCCGGATTCGAAACGGCGTTGGCGGCTCGCGCTCTCCGGAAGCAACGCGCTCAACTTGATCGCACGCGCTCCGGCGCGCAGAAAGCACTTCGCGGTCTGAAATTTATCAGCAGTAAATCAAACGGCGTTGATGCGTGGAACGAGGTGCAGAGCAACTTCAGTAGGCTCGCCAAGGACGGTTTTCTCTATCGCGCTGATTTCGCTCAATGCATAGGTATGAAGGATTCGAAGGAATTTGCTCTGGAACTGTTTGATGCTCTGAGTCGTAAACGAAGGTTGAGAGTTGACAAAATCAGCAGGGATGAACTGTTCGAATTCTGGTCGCAAATTACCGATCAGAGTTTTGATTCGCGGCTTCAGATCTTCTTCGACATGGTGGACAAGAACGAAGATGGGAGAATCACCGAAGAAGAAGTAAAAGAGATCATCATGTTAAGCGCTTCTGCAAATAGGTTGTCCAGATTGAAGGAGCAGGCCGAAGAATATGCAGCTCTCATCATGGAAGAGTTAGACCCCGAAGGACTTGGCTACATCGAGCTGTGGCAATTGGAGACGCTTCTTTTACAAAAGGACACGTACCTCAACTACAGCCAAGCTTTAAGCTACACAAGCCAAGCTTTGAGCCAGAACCTACAGGGTCTAAGGAAGAAAAGTCCTATACGAAGAATGAGCCGCAGATTGCTCTACTATTTGCAAGAGAATTGGAAGAGACTTTGGGTTTTAACATTGTGGGTTTGCATAATGATTGGGCTGTTCACGTGGAAGTTTATTCAATACAAGCAGAAAGATGCATTTAAGATCATGGGCTACTGTCTTCTCACGGCTAAAGGTGCGGCTGAGACCTTAAAGTTGAACATGGCACTTATACTCTTGCCCGTATGCAGAAACACCATAACTTGGCTCAGGTCTACCAAGCTGGGACACGCTGTACCTTTTGATGACAACATCAACTTTCATAAGACAATTGCTGGGGCCATCGTGATTGGTGTTATACTTCATGCCGGGGATCACCTTGCTTGTGATTTTCCGAGACTTGTAAGGTCATCTGAAGAAAATTATCAAACGTATTTGAAAGGTGTATTTGGTAAGCATAAACCCAGTTATGGAGACCTAGTTAAAGGCGTCGAGGGTGTGACTGGAATTTTGATGGTGATTTTTATGACAATAGCATTTACACTTGCAACCAAATGGTTCCGCAGAAATCTCATTAAGCTGCCTAAACCATTTAGTAGGCTCACTGGGTTCAATGCCTTCTGGTATTCACACCATCTGTTTGTCATTGTCTATGTCCTCCTCGTCATCCACGGAATAAAACTTTACCTCGTGCATGAATGGCACCTTAAAACGACATGGATGTATCTTGCGGTTCCAGTTTTGCTTTATGCGTCAGAGAGAATACTCAGATTATTCCGTTCTGGTTTATATACTGTCCGTCTCGGCAAGGTTGCCATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGCTACAAGAGCGGACAATACATGTTTGTACAGTGTCCTGCTGTTTCTCCGTTTGAGTGGCATCCTTTCTCTATTACCTCAGCCCCTGGCGATGACTACCTGAGTGTTCACATTAGGCAACTTGGTGATTGGACACAGGAGCTTAAAAGGGTGTTCTCTGAGGCCTGTGAGCCTCCTGTATCCGGGAAGAGTGGGCTTCTCAGGGCTGATGAAACGACTAAGAAGAGTTTGCCGAAGTTAAAGATAGATGGACCTTACGGTGCGCCGGCACAAGATTATAGAAAATACGATGTTTTGTTACTTGTCGGTCTCGGGATAGGAGCAACACCTTTCATCAGCATTCTGAAAGATCTTCTCAACAACATCATCAAAATGGAGGAGATGGCGGACTCAGTCTCCGATATTAGCAAAGGTTCAGACCTTAGTGCTGGGAGTACTACTGATTCACCATCTCTTAATAAAATTGCGCCAAAACGGAAGAAAACACTGAAGACTACCAACGCTTATTTCTACTGGGTTACGAGAGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAGTAGCAGAGCTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACTAGCGTATACGAGGAAGGGGATGCTAGATCCGCCCTTATCACCATGGTGCAAGCACTCAACCATGCCAAAAATGGAGTTGACATTGTTTCTGGCACTAGAGTGCGAACCCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAAAATGTGTTCCAAGCACTGTAATGGACGAATAGGGGTATTTTATTGTGGCGCACCAGTTTTGGCCAAAGAACTTAGCAAACTCTGCTTTGAGTTCAATGAAAAGGGTTCAACAAAATTTGAGTTCCACAAGGAGCATTTCTAA 2823 0.4747 MNGIPKHERRWASDTVPGKATVSAGTSPGTESNSAAEEFVEVTLDLQDDDTIVLRSVEPASVINIDDSVSGSGYETPASVTRSPTIRRSSSRGFRQFSQELKAEAVAKARQFSQELRRFSWSHGNASRALSSSSAPNAGAGFETALAARALRKQRAQLDRTRSGAQKALRGLKFISSKSNGVDAWNEVQSNFSRLAKDGFLYRADFAQCIGMKDSKEFALELFDALSRKRRLRVDKISRDELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANRLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIRRMSRRLLYYLQENWKRLWVLTLWVCIMIGLFTWKFIQYKQKDAFKIMGYCLLTAKGAAETLKLNMALILLPVCRNTITWLRSTKLGHAVPFDDNINFHKTIAGAIVIGVILHAGDHLACDFPRLVRSSEENYQTYLKGVFGKHKPSYGDLVKGVEGVTGILMVIFMTIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLVIHGIKLYLVHEWHLKTTWMYLAVPVLLYASERILRLFRSGLYTVRLGKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEMADSVSDISKGSDLSAGSTTDSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGSTKFEFHKEHF 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02472 940 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 733 940 IPR039261 -
Cca09g02472 940 MobiDBLite consensus disorder prediction 72 93 - -
Cca09g02472 940 MobiDBLite consensus disorder prediction 1 35 - -
Cca09g02472 940 Pfam Ferric reductase like transmembrane component 416 572 IPR013130 -
Cca09g02472 940 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
Cca09g02472 940 PANTHER NADPH OXIDASE 27 940 - -
Cca09g02472 940 Gene3D - 726 940 IPR039261 -
Cca09g02472 940 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 611 731 IPR017927 GO:0016491
Cca09g02472 940 SUPERFAMILY Riboflavin synthase domain-like 614 727 IPR017938 -
Cca09g02472 940 Gene3D - 158 274 - -
Cca09g02472 940 MobiDBLite consensus disorder prediction 19 35 - -
Cca09g02472 940 Gene3D Translation factors 603 694 - -
Cca09g02472 940 CDD NOX_Duox_like_FAD_NADP 620 882 - -
Cca09g02472 940 CDD EFh 217 283 IPR002048 GO:0005509
Cca09g02472 940 ProSitePatterns EF-hand calcium-binding domain. 266 278 IPR018247 -
Cca09g02472 940 Pfam FAD-binding domain 615 728 IPR013112 GO:0016491
Cca09g02472 940 PRINTS Cytochrome B-245 heavy chain signature 517 540 IPR000778 GO:0016020|GO:0016491
Cca09g02472 940 PRINTS Cytochrome B-245 heavy chain signature 717 730 IPR000778 GO:0016020|GO:0016491
Cca09g02472 940 PRINTS Cytochrome B-245 heavy chain signature 740 757 IPR000778 GO:0016020|GO:0016491
Cca09g02472 940 Pfam Ferric reductase NAD binding domain 735 922 IPR013121 GO:0016491
Cca09g02472 940 PANTHER RESPIRATORY BURST OXIDASE2 27 940 - -
Cca09g02472 940 Pfam Respiratory burst NADPH oxidase 157 256 IPR013623 GO:0004601|GO:0050664
Cca09g02472 940 SFLD NADPH oxidase subgroup (NOX) 104 940 - -
Cca09g02472 940 SUPERFAMILY EF-hand 185 335 IPR011992 -
Cca09g02472 940 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02472 Cca-Chr9 50234739 50242797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02472 9 940 Miscellaneous Gene Families AT1G64060 79.087 0.0 1548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02472 K13447 - gmx:100801077 1773.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01823 06 33659135 33668691 Cca09g02472 09 50234739 50242797 PCT