Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02390 ATGAGCAAGTTGTGGACCTTGATTACCCAACTTCATTCCCTTGCTGGGCCGGTGGTGACGTTATTGTATCCTTTGTATGCATCAGTGGTGGCTATAGAGAGCACATCTAAATTGGATGACGAGCAGTGGCTTGCTTATTGGATCATTTATTCGTTTCTCACCCTCATGGAAATGGTTCTCCAGTCTCTCTTGGAGTGGATTCCAATTTGGTACGATGTGAAGCTATTGGTGGTGGCGTGGCTGGTGTTGCCGCAGTTCAAAGGAGCAACTTTCTTGTATGAAAGGTTCGTGAGACAGTACATTCGGGCCTACGTAACGGAGAGGGTGCCCCACCACGATAAGTCTCCCAACGGTGGCAAGACCAAGCATAAGTTTTTTGACTTCATCGCATCCAAGAAAGGGGATCATGATGCATGA 417 0.4748 MSKLWTLITQLHSLAGPVVTLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQSLLEWIPIWYDVKLLVVAWLVLPQFKGATFLYERFVRQYIRAYVTERVPHHDKSPNGGKTKHKFFDFIASKKGDHDA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02390 138 PANTHER HVA22-LIKE PROTEINS 1 138 IPR004345 -
Cca09g02390 138 PANTHER HVA22-LIKE PROTEIN 1 138 - -
Cca09g02390 138 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02390 Cca-Chr9 49286517 49287757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02390 K17279 - qsu:112028152 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02390 09 49286517 49287757 Cca09g02390 09 49286517 49287757 ECH