Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02385 ATGTCTTCTGAAACCCTAGAAAACGAGAAGCCTCACGCCGAAGAAGAACCCCAGGCTCAAGACAACCACACCGAGCAAGACAACAAAGCCgaagaagaaatggatcagacagaagaagagaagaaTgaagaggaagaggaagaggaagaggaagaagaagagACCGAGGACCGTGTCAAAGTGAAGTCAAACAAGTCAACGAAAGAAAGCGGTTTCACCACGCCAGTCAGTGAGAGACCAACTAGGGAGAGGAAAACGGTGGAGAGGTACACTGTTTCTTCGCCCGATAAGTTTCCTGGATATTCTACTTTCAAAGCTCTCTCAATTGAAAAGGGAAGCGGTACGCAGCTCAAGGACATTCCAAATGTGGCTTTCAAGTTATCAAAGAGAAAAACTGATGACAACCTGCGTACACTTCATAGTATATTATTTGGGAGGAAAGGAAAGGCACACAATCTAAAGAAAAATATAGGACTGTTTTCTGGCTATGTGTGGACTGAAAATGAGGAAAAACAAAGGGCGAAGATAAGGGAGAAACTTGACAAATGTGTGAAAGAAAAGTTGGTGGACTTTTGCACTTTGCTTAATATTCCAATAAATAAGGCCAGTATGAAGAAGGAGGAACTGTCTGCAAAGTTGTTGGAATTTTTGGAGTCCCCACATGCTACAACTGATGTTCTGCTTGCTAATAAGGAAAAGAAAGGTAAAAAGCGAGCCATAAAGGAAAAACCACGCAAATCTTCTGGGGAAGGATCAGAAACAACTGCCAAGAAGCAGAAGCAAACTTCACAAGTTGGGAAAAAGCGAAAGCAGTCTTCTGATGTTTCAGATGATGATATATCTGAACCTTCAGATGCAGAAGTTGATTCTCAGGAAGATGATGTTTCAGTGCCAAAAAGTGAAAGTGATCATGAGGAAAGCAAGTCAGAGAACGAGGAAGATAATCAAAAGGCTCAAAAACGTACTTCAAAAAAGACTTTGAAAGATGATCAAACCACGTCAGTAAAGGAAGCCAAGAGCAATGAAAAAACTGCTAAAAAATCTACTTCAAAAAAGGTTGTTACTGACAATACTATTAAGCCCAAGCAATCTGCTTCCAAGAAACAGAAAACTTCAAGGGAAGACCAGAACTCTAAAGGGAAGGTTGCAAACAAAAAGCAAACTGACAAGTCTCCTAAGGCTTTAGTTAAGGATCAAGGCAAAGGTAAAAGTAGTGAGAAAGCAAAAGCAGAACCTAGTAGGAAGGAGATGCATCAAGTGGTTGTTGATATTTTGAAGGAAGTAGATTTCAATAAGGCAACTTTATCTGACATCCTCAGACAACTAGGTGCCCACTTTGACTTGGATTTGATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAGCATGTCtgatgatgatggggaggaagcggaaaatgttggggatgatgatgcagaagatgatgtgtga 1467 0.3667 MSSETLENEKPHAEEEPQAQDNHTEQDNKAEEEMDQTEEEKNEEEEEEEEEEEETEDRVKVKSNKSTKESGFTTPVSERPTRERKTVERYTVSSPDKFPGYSTFKALSIEKGSGTQLKDIPNVAFKLSKRKTDDNLRTLHSILFGRKGKAHNLKKNIGLFSGYVWTENEEKQRAKIREKLDKCVKEKLVDFCTLLNIPINKASMKKEELSAKLLEFLESPHATTDVLLANKEKKGKKRAIKEKPRKSSGEGSETTAKKQKQTSQVGKKRKQSSDVSDDDISEPSDAEVDSQEDDVSVPKSESDHEESKSENEEDNQKAQKRTSKKTLKDDQTTSVKEAKSNEKTAKKSTSKKVVTDNTIKPKQSASKKQKTSREDQNSKGKVANKKQTDKSPKALVKDQGKGKSSEKAKAEPSRKEMHQVVVDILKEVDFNKATLSDILRQLGAHFDLDLMHRKAEVKDIITDVINSMSDDDGEEAENVGDDDAEDDV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02385 488 MobiDBLite consensus disorder prediction 1 30 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 1 89 - -
Cca09g02385 488 Coils Coil 166 186 - -
Cca09g02385 488 PANTHER DEK PROTEIN 1 485 IPR044198 GO:0003677|GO:0006325
Cca09g02385 488 Gene3D - 404 467 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 351 365 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 468 488 - -
Cca09g02385 488 Coils Coil 20 65 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 466 488 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 367 417 - -
Cca09g02385 488 PANTHER OS01G0924900 PROTEIN 1 485 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 31 55 - -
Cca09g02385 488 Pfam DEK C terminal domain 412 464 IPR014876 -
Cca09g02385 488 MobiDBLite consensus disorder prediction 254 269 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 292 350 - -
Cca09g02385 488 SUPERFAMILY DEK C-terminal domain 406 466 - -
Cca09g02385 488 MobiDBLite consensus disorder prediction 227 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02385 Cca-Chr9 49242973 49250026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02385 K17046 - gmx:100785644 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02385 09 49242973 49250026 Cca09g02385 09 49242973 49250026 ECH