Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02381 ATGCTACGTTCAATCGTAATCTTATCCTTCTTCATCTTTGGACTCCTTGTTTTTATTCCAGGTAGTGCAATGGGTGAACATAGCAGAAAAATATTAAGGGTGGATGACAAGTGTGACAAGTCCACTATCCAAATAAACCAAAGTCCCACGGCACCTCTTCCAAGTGGCATCCCCACATACACAGTTGAGATAATGAACACGTGTGTGAATGGATGCAACATCTCTCAAATTCACGTTAACTGTGACATGTTCAGTTCTGCAATTCTCATCAACCGTAAAATCTTCAGAAGACTTCGTTACAGTGACTGTCTCGTTAATAATGGCATGCCATTGCGTAATGGAGCTATTATTTCCTTTAAATATGCCACTACTTTCCCTTATGCCCTCTCCGTTTCCTCTGTGCTCTGTAGCTGA 414 0.413 MLRSIVILSFFIFGLLVFIPGSAMGEHSRKILRVDDKCDKSTIQINQSPTAPLPSGIPTYTVEIMNTCVNGCNISQIHVNCDMFSSAILINRKIFRRLRYSDCLVNNGMPLRNGAIISFKYATTFPYALSVSSVLCS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02381 137 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 33 137 IPR040361 -
Cca09g02381 137 PANTHER PROTEIN TAPETUM DETERMINANT 1 33 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02381 Cca-Chr9 49180536 49186452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02381 - - pvu:PHAVU_002G284400g 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02381 09 49180536 49186452 Cca09g02381 09 49180536 49186452 ECH