Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02356 ATGGGAAAGGAGAACCAAGCCTCCGCTATGGAAATCGACGCCCCAAAATCGACGAATTCTGATCAGATCGTTCCCAAATTCTCCATAAACGTACTGCAGCTCCTGAAATCCGCGCAAATGCAGCACGGTTTGCGCCATGGAGATTACGCTCGCTATAGGAGGTATTGCACAGCTCGATTAAGGAGGTTATATAAATCGTTAAAGTTTACCCATGGTCGTGGCAAATATGCAAAAAGAGCCATAACTGAGTCCACCGTCACTGAAGTAAGGTTTCTTCATCTAATTCTCTATACAGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGCCCAAATGCACGTCAACGTATATATTTGATTGGTAGGTTGCGGAAAGCAGTAAAATGGGCAACTTTGTTTTCACAACTGTGTGCGATCAAGGCAGATTCTAGAACATCTTTGGAAGCTGAGGCTTATGAATCCTATATGAGAGGGAGTTTGTTGTTTGAGCAAGATCAGAATTGGGATGTGGCTTTGAAGCACTTCAAAAGTGCTAGGGCTGTATATGAGGAATTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGCCGTGAGCGAGTTGAGGAACTAGAACCTAGTATCCGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAGGCCTCTGAACTTCTACAAATTGGTGATGTGGAAGGTCCTGCATTAGACCTTTTTAAAGCAAAATTAGAGGCTGTCATGGCCGAGGCAAGATCTCAACAGGCCGCTTCCATGACAGAGTTTCTTTGGCTTGGCCACAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATCTTGAAAGCTCAGGAGCTGGAGAAAGATATACATGGTACCCAGGCAGACTCAATTCCAGCAGACAAAAGACTTGTTATTTTTGACAAAATATTTTCTGCATATCATGAAGCCAGGGGCTATATTCGGGCTGATTTGGCTACTACAGGAAGTACAGAAAGTGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCCTAGGAGAAAGAACCATTGAGCGCAACCTCTTGTTGGTTAAGGTTGCAAAAAGCAAACTTGCAAAGCGTCATGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAACTTGTTCGCCTATATGATCTCTTGCTACAGAATACAGCCGATCTATCAGATTTAGTCAGTTCTGGAAGGGATAAAAAGCCAGAAGAAGTTAGCTTCGCTGAAGTGTGTTCATGCAAAAGTTTGGCTTTTCGAGCTCAAAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCATTATATGGCCGTGCTCGCAATTTGGCTGATGATGCCTTAAGAAAGTTTCAAATGTTAGATGGTGATAATAAGATTTTGATGAAAGAGTTAGAGGACTTGTACAATGAGTGCCGATCTAACAGTTGTATAGAGCATGCGCTGGGGATAATGGAGGAGAAGAGGACCCAAGAGAATCTATCTGAAAAGATCTCCAATATATCATTGACCGGAACTGAGCGGTTGGAGAAGTTCCTTCTTGAGAAACTTGATGTGTATGAGTCTGCCGTGGGTGATTCAAATGTGAAGTGTACACCACGCATTGCAGGCTTTCCCCCAGCTTTCCAGGCAATTTCCCGTAATCCTATTGTGCTGGATCTGGCTTATAACATGATCGAATTCCCATCTATTGAAAATAGGATGAAGAAGGATAGAAAAGCCAAGGGAGGCTTTATGAGTAGAATATTTGGATGA 1812 0.4283 MGKENQASAMEIDAPKSTNSDQIVPKFSINVLQLLKSAQMQHGLRHGDYARYRRYCTARLRRLYKSLKFTHGRGKYAKRAITESTVTEVRFLHLILYTAERAWSHAMEKRQLPNGPNARQRIYLIGRLRKAVKWATLFSQLCAIKADSRTSLEAEAYESYMRGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLQIGDVEGPALDLFKAKLEAVMAEARSQQAASMTEFLWLGHRFPISNAKTRVAILKAQELEKDIHGTQADSIPADKRLVIFDKIFSAYHEARGYIRADLATTGSTESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRHDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFAEVCSCKSLAFRAQRCFYVAKSYSVAGKRAEAYALYGRARNLADDALRKFQMLDGDNKILMKELEDLYNECRSNSCIEHALGIMEEKRTQENLSEKISNISLTGTERLEKFLLEKLDVYESAVGDSNVKCTPRIAGFPPAFQAISRNPIVLDLAYNMIEFPSIENRMKKDRKAKGGFMSRIFG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02356 603 CDD SRP68-RBD 30 218 IPR034652 GO:0003723
Cca09g02356 603 PIRSF SRP68 27 597 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Cca09g02356 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Cca09g02356 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 16 601 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Cca09g02356 603 Gene3D - 26 222 IPR038253 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02356 K03107 - gmx:100816486 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02356 09 48879580 48888175 Cca09g02356 09 48879580 48888175 ECH